Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TPTE2P6-202ENST00000445572 1007 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC004022.1-201ENST00000447766 1066 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC073264.2-201ENST00000448886 166 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 NPM1P39-201ENST00000449818 867 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RN7SL354P-201ENST00000469282 294 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 NDUFA5P9-201ENST00000472609 340 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC069528.1-202ENST00000482888 637 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC073522.1-201ENST00000483312 377 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RN7SL346P-201ENST00000491561 294 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RPL23AP72-201ENST00000492447 435 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 MRPS33P2-201ENST00000507850 322 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 IGJP1-201ENST00000522682 475 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC010306.1-201ENST00000523223 1117 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC068714.1-201ENST00000559623 800 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 MIR4697-201ENST00000582977 78 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 Z99289.3-201ENST00000605586 594 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC016717.3-201ENST00000624730 554 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC092608.3-201ENST00000625017 386 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 RNA5SP191-201ENST00000362585 102 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 SNORA5.1-201ENST00000384275 131 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 RNU6-636P-201ENST00000384598 107 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 RNU6-1242P-201ENST00000391052 103 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 NPM1P40-201ENST00000412758 733 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AF186996.5-201ENST00000418098 904 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC084290.1-201ENST00000434995 374 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 RPL5P25-201ENST00000441148 775 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 RPS7P5-201ENST00000441482 581 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 OR7E125P-201ENST00000443450 846 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AL354714.3-201ENST00000447284 493 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 IGHV5-78-201ENST00000450948 295 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 NPM1P13-201ENST00000452663 865 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AP006289.1-201ENST00000538089 277 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC091042.1-201ENST00000579213 173 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AP001542.2-201ENST00000593141 364 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms