Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC079684.1-201ENST00000621405 437 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AL359922.3-201ENST00000624779 1670 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 MIR490-201ENST00000384865 128 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AL139247.1-201ENST00000422768 325 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 CREM-238ENST00000488741 651 ntTSL 2 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC108145.1-201ENST00000503770 153 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC006064.5-201ENST00000541782 248 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC005412.1-201ENST00000580812 1049 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AC021242.1-201ENST00000507315 2035 ntBASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
ALMS1Q8TCU4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 PPIAP15-201ENST00000479662 484 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 KRT19P6-201ENST00000510983 209 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AL352979.3-201ENST00000553515 247 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AL160290.3-201ENST00000604869 165 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC019176.2-201ENST00000611579 315 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AP000648.2-201ENST00000624182 404 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC104306.1-201ENST00000449702 371 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AL358832.1-201ENST00000497800 389 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC114878.2-201ENST00000604863 1251 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC007390.2-201ENST00000606229 3803 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 MTCO1P7-201ENST00000419523 1542 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 RPS24P12-201ENST00000402084 394 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 RPL35AP15-201ENST00000468042 339 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 SETP1-201ENST00000556014 845 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AF001550.2-201ENST00000636643 217 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 CASC19-206ENST00000641028 1430 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 RNVU1-14-201ENST00000384770 164 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC007738.1-201ENST00000413892 348 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 RPS20P21-201ENST00000466859 343 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 MTND1P6-201ENST00000523621 946 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC091178.1-203ENST00000584586 279 ntBASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
ALMS1Q8TCU4 MTND5P1-201ENST00000445440 1375 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 U1.1-201ENST00000384101 164 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 SNORA57.3-201ENST00000411095 141 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 RPL23AP81-201ENST00000455252 467 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 AL049874.2-201ENST00000492636 288 ntBASIC2.81□□□□□ -1.96
ALMS1Q8TCU4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms