Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 AC005242.1-201ENST00000585658 438 ntBASIC4.84□□□□□ -1.63
LMO3Q8TAP4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 AL096803.3-201ENST00000609032 532 ntBASIC4.84□□□□□ -1.63
LMO3Q8TAP4 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.84□□□□□ -1.63
LMO3Q8TAP4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 OR5AC4P-202ENST00000642086 985 ntBASIC4.84□□□□□ -1.63
LMO3Q8TAP4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 AP001273.1-201ENST00000624493 3152 ntBASIC4.84□□□□□ -1.63
LMO3Q8TAP4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LMO3Q8TAP4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LMO3Q8TAP4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
LMO3Q8TAP4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 CASC19-255ENST00000641733 1385 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 SNORD116-2-201ENST00000384274 95 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 SNORD116-6-201ENST00000384711 96 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL049545.1-201ENST00000401856 572 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL589994.1-201ENST00000404962 340 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 ZNF602P-201ENST00000405929 924 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 RN7SKP97-201ENST00000410966 333 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 CEACAMP8-201ENST00000413902 580 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 MTATP6P20-201ENST00000414147 562 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 TRIM60P17-201ENST00000415181 719 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC019050.1-201ENST00000418508 492 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 ZNF885P-201ENST00000420174 1098 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC241520.1-201ENST00000422654 1099 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 PTP4A1P7-201ENST00000423476 514 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC115285.1-201ENST00000424879 736 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 RPEP2-201ENST00000432149 701 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC073264.2-201ENST00000448886 166 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 RPL31P20-201ENST00000449593 360 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL645937.3-201ENST00000453647 936 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 SETP6-201ENST00000479329 568 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC117522.2-201ENST00000510049 657 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC021146.3-201ENST00000511911 260 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AP006289.1-201ENST00000538089 277 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 RPL23AP97-201ENST00000568955 471 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC115286.1-201ENST00000604298 434 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL451086.1-201ENST00000605596 223 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC026741.1-201ENST00000605892 482 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL512427.1-201ENST00000618593 349 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AP003485.2-201ENST00000623636 610 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AC021106.3-201ENST00000623925 531 ntBASIC4.83□□□□□ -1.64
LMO3Q8TAP4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LMO3Q8TAP4 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.82□□□□□ -1.64
LMO3Q8TAP4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO3Q8TAP4 Z95331.1-201ENST00000623075 23112 ntBASIC4.82□□□□□ -1.64
LMO3Q8TAP4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms