Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL136221.1-201ENST00000621449 509 ntBASIC5.68□□□□□ -1.5
NUP43Q8NFH3 AC093591.3-201ENST00000634516 308 ntBASIC5.68□□□□□ -1.5
NUP43Q8NFH3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 AC245100.2-201ENST00000454544 1679 ntBASIC5.68□□□□□ -1.5
NUP43Q8NFH3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
NUP43Q8NFH3 PPBPP2-201ENST00000513150 1362 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC073365.1-203ENST00000641055 1992 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 IMMTP1-201ENST00000435590 2219 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC093311.1-201ENST00000506586 2021 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 RARSP1-201ENST00000542842 1418 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 MTND5P23-201ENST00000430812 1655 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 OR7E101P-201ENST00000400428 513 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 GSTA9P-201ENST00000406231 611 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 SNORA77.2-201ENST00000408571 112 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 RN7SKP108-201ENST00000411367 328 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 BOLA3P4-201ENST00000418151 400 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 BMS1P19-201ENST00000433925 393 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 H3F3BP1-201ENST00000440551 403 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 USP9YP12-201ENST00000450481 570 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC002553.3-201ENST00000453002 341 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC098583.1-201ENST00000480875 255 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC097173.1-201ENST00000505862 819 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AF131216.2-201ENST00000512316 564 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 MTCO1P30-201ENST00000515244 580 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 SNORA18.6-201ENST00000516792 115 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 RNA5SP441-201ENST00000516809 88 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AP001893.2-201ENST00000526949 202 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 HMGB1P33-201ENST00000563485 527 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL078601.3-201ENST00000573303 535 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 RN7SL230P-201ENST00000580835 303 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC115286.1-201ENST00000604298 434 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC090525.3-201ENST00000605601 189 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL590282.1-201ENST00000610379 1136 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL136097.3-201ENST00000611097 505 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL020991.1-201ENST00000612314 373 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL080312.2-201ENST00000613001 630 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 MIR6778-201ENST00000617912 73 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC243756.2-201ENST00000618406 463 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AP002505.2-201ENST00000623585 696 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AP003122.6-201ENST00000623831 495 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 GDI2P1-201ENST00000429312 1336 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 AL354854.1-201ENST00000455940 1363 ntBASIC5.67□□□□□ -1.5
NUP43Q8NFH3 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NUP43Q8NFH3 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms