Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL359073.1-201ENST00000448036 403 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 RPL7P24-201ENST00000493052 752 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AL020997.2-201ENST00000602607 184 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AC055839.1-201ENST00000634467 498 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AL022311.1-201ENST00000623726 19416 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AC005261.2-201ENST00000593427 4258 ntBASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VPS8Q8N3P4 AL139039.2-201ENST00000407436 479 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AL158073.1-201ENST00000426848 1104 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 MTCO1P54-201ENST00000430139 712 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AC017037.1-201ENST00000508460 471 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 MIR1254-2-201ENST00000579553 63 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AL392048.1-201ENST00000613946 534 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AL669942.2-201ENST00000620352 697 ntBASIC6.26□□□□□ -1.41
VPS8Q8N3P4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.26□□□□□ -1.41
VPS8Q8N3P4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 RN7SKP27-201ENST00000410684 333 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 RPS17P13-201ENST00000448974 407 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 SCARNA14-201ENST00000516903 136 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 RNA5SP179-201ENST00000517284 121 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 IGKV2-38-201ENST00000517443 247 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC007991.1-201ENST00000522680 631 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AL161637.1-201ENST00000622380 412 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 NCOA4P2-201ENST00000340589 1813 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 MIR199A2-201ENST00000385289 110 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 CYCSP19-201ENST00000411715 316 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC011742.1-201ENST00000431448 434 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC239367.2-201ENST00000447309 705 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 RPS4XP12-201ENST00000461747 709 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 UBTFL9-201ENST00000534504 1148 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC091167.4-201ENST00000605079 184 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 AC124312.6-202ENST00000623624 418 ntBASIC6.25□□□□□ -1.41
VPS8Q8N3P4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 AL161912.2-201ENST00000565707 3007 ntBASIC6.24□□□□□ -1.41
VPS8Q8N3P4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 RNA5SP52-201ENST00000362448 134 ntBASIC6.24□□□□□ -1.41
VPS8Q8N3P4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 U1.1-201ENST00000384101 164 ntBASIC6.24□□□□□ -1.41
VPS8Q8N3P4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 FTH1P11-201ENST00000517577 551 ntBASIC6.24□□□□□ -1.41
VPS8Q8N3P4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
VPS8Q8N3P4 GLRXP2-201ENST00000555594 321 ntBASIC6.24□□□□□ -1.41
VPS8Q8N3P4 AGGF1P6-201ENST00000569213 976 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms