Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RPS27AP16-201ENST00000492222 470 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 OR9N1P-202ENST00000494289 481 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SETP12-201ENST00000514068 805 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC034205.1-201ENST00000520621 638 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 MTND2P7-201ENST00000521337 640 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC009643.1-201ENST00000532030 391 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC018552.1-201ENST00000562099 811 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC027455.1-201ENST00000574104 594 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 MIR4277-201ENST00000578298 84 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RPL7P50-201ENST00000600588 727 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 MTCO3P22-201ENST00000603219 784 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC010201.1-201ENST00000605051 540 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC034236.3-201ENST00000605999 461 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AC074140.1-201ENST00000621617 208 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 AL356094.1-201ENST00000624663 1212 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 MAPK10-320ENST00000641462 6696 ntBASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
C9orf40Q8IXQ3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC091046.3-201ENST00000631455 1574 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 MAPK10-303ENST00000641324 3959 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 OR5P1P-201ENST00000299512 925 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC126755.2-208ENST00000327792 462 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC138969.1-213ENST00000331436 462 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 RNA5SP443-201ENST00000363083 132 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 SNORD51.1-201ENST00000365405 77 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 Z86062.1-201ENST00000406773 777 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC016397.1-201ENST00000412463 242 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 RPS20P14-201ENST00000412545 360 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC019070.1-201ENST00000415008 1024 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 UBE2V1P3-201ENST00000439651 417 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 DDX39BP2-208ENST00000453923 258 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC005008.1-201ENST00000456151 612 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC037198.2-201ENST00000478845 733 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 RN7SL817P-201ENST00000480777 288 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 MYL12AP1-201ENST00000518490 515 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC018442.3-201ENST00000523025 183 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 GSTP1P1-201ENST00000548078 319 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 CKS1BP1-201ENST00000555221 240 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 RPL21P7-201ENST00000557463 483 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AF230666.2-201ENST00000602328 725 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AL160290.3-201ENST00000604869 165 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC242628.1-201ENST00000606810 391 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 LINC00901.1-201ENST00000617252 152 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AL035461.2-201ENST00000619201 524 ntBASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.1□□□□□ -1.75
C9orf40Q8IXQ3 AC090017.1-201ENST00000548612 1779 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 MIR141-201ENST00000384975 95 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 MIR3065-201ENST00000390137 79 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 RNA5SP372-201ENST00000390836 115 ntBASIC4.09□□□□□ -1.75
C9orf40Q8IXQ3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms