Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC109635.6-201ENST00000525487 1113 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 HMGB3P26-201ENST00000560051 582 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC027281.1-201ENST00000574178 758 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC105105.5-201ENST00000622635 1294 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC015908.5-201ENST00000623289 343 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 AC021106.3-201ENST00000623925 531 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 MFSD8-242ENST00000641690 4199 ntBASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC50Q8IVM0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 MIR550A3-201ENST00000390735 95 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AL049697.2-201ENST00000403708 294 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 RN7SKP56-201ENST00000410513 331 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 MTCYBP7-201ENST00000419540 1134 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 PRELID3BP10-201ENST00000431957 584 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 RNU6-319P-201ENST00000516025 108 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 MIR2114-201ENST00000516645 80 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 snoU109.6-201ENST00000516831 118 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 RPL23AP97-201ENST00000568955 471 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 MIR4270-201ENST00000581799 70 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 MIR4480-201ENST00000582492 71 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 SNX6P1-201ENST00000601728 1224 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AL590410.1-201ENST00000617925 333 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 RMST_5.1-201ENST00000618704 126 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.59□□□□□ -1.67
CCDC50Q8IVM0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC50Q8IVM0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC50Q8IVM0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CCDC50Q8IVM0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC125257.1-201ENST00000560400 2930 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 MAPK10-253ENST00000641010 4072 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 RNA5SP87-201ENST00000384155 118 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 GLULP6-201ENST00000399502 913 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AL607077.1-201ENST00000401718 499 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 HSPD1P16-201ENST00000402302 394 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 NCSTNP1-201ENST00000406229 144 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 HMGB1P32-201ENST00000425971 565 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 RPL7P4-203ENST00000430239 730 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 Z85994.2-201ENST00000434327 452 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC069277.2-201ENST00000454211 432 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AL133244.1-201ENST00000456007 258 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 APOOP2-201ENST00000461561 539 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 SEC11B-201ENST00000518383 499 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC069061.3-201ENST00000582254 823 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC005034.4-201ENST00000603612 899 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC007620.3-201ENST00000608131 497 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AL049536.1-201ENST00000625043 744 ntBASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC50Q8IVM0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms