Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 SNORD3H-201ENST00000384486 214 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC007066.1-201ENST00000392902 381 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 RN7SL812P-201ENST00000493791 279 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 EIF4BP1-201ENST00000554881 351 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC006349.1-201ENST00000555526 235 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 IMMP1LP1-201ENST00000605170 488 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL513477.2-201ENST00000607858 568 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL645927.2-201ENST00000618350 349 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC079684.1-201ENST00000621405 437 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 TEX41-256ENST00000626411 368 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 ZNF962P-201ENST00000443465 3140 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 RPS3AP6-201ENST00000484430 795 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL049874.2-201ENST00000492636 288 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC091516.1-201ENST00000549191 703 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 MRPS21P9-201ENST00000571150 257 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 CYCSP40-201ENST00000575927 294 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC074029.4-201ENST00000624796 1859 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL161912.2-201ENST00000565707 3007 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 OR51H2P-202ENST00000641424 3046 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 OR6K3-202ENST00000368146 996 ntBASIC2.8□□□□□ -1.96
CSMD3Q7Z407 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CSMD3Q7Z407 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 CYCSP24-201ENST00000445119 316 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 CSNK1A1P1-202ENST00000563423 981 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC005972.3-201ENST00000606304 481 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 U3.45-201ENST00000607547 219 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC064801.1-201ENST00000612025 407 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AL031658.2-201ENST00000616850 651 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC092435.3-201ENST00000565538 3654 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC239868.2-201ENST00000564237 4527 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC022417.1-201ENST00000624768 1303 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 RPS7P15-201ENST00000415804 584 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 CYCSP4-201ENST00000429682 331 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CSMD3Q7Z407 RN7SL601P-201ENST00000471221 293 ntBASIC2.79□□□□□ -1.96
CSMD3Q7Z407 AC106707.2-201ENST00000484182 374 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms