Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 HSPD1P14-201ENST00000432666 1618 ntBASIC5.28□□□□□ -1.56
PDS5AQ29RF7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PDS5AQ29RF7 AL672167.1-205ENST00000641112 3080 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AP000568.1-201ENST00000282964 442 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 MIR383-201ENST00000362257 73 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 SNORD51.1-201ENST00000365405 77 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AL161909.1-201ENST00000397390 712 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AL157831.1-201ENST00000426134 473 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 RPL23AP25-201ENST00000430973 463 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 ATP5G1P3-201ENST00000463301 410 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AP000942.1-201ENST00000463969 747 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 STRADBP1-201ENST00000478954 1281 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 ATP1B1P1-201ENST00000509767 915 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC090151.1-201ENST00000520784 730 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 OR5BC1P-201ENST00000529327 739 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AL109766.1-201ENST00000555080 552 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AP003117.1-201ENST00000602771 554 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AL021997.2-201ENST00000615674 271 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AP003499.2-201ENST00000624100 483 ntBASIC5.27□□□□□ -1.57
PDS5AQ29RF7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PDS5AQ29RF7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 ATP5F1P2-201ENST00000398143 760 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AL583835.1-201ENST00000399570 407 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC097374.1-203ENST00000400783 485 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AL356057.1-202ENST00000402263 756 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 PTGES3P2-201ENST00000407942 482 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 MTCO1P45-201ENST00000431457 267 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 FTLP19-201ENST00000433300 394 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 RAB9AP5-201ENST00000437794 597 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 RAB9AP2-201ENST00000443911 597 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 RPL31P20-201ENST00000449593 360 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC105137.1-201ENST00000484355 562 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC108022.1-201ENST00000493466 478 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 RPS4XP18-201ENST00000495480 763 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 PCNAP1-201ENST00000505363 709 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 RNA5SP73-201ENST00000516744 108 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 NPM1P6-201ENST00000521088 871 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC006116.5-201ENST00000591936 559 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 MIMT1-201ENST00000597105 1050 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC005776.1-201ENST00000603164 290 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AL161729.3-201ENST00000603533 673 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC120053.1-201ENST00000607706 736 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 AC068724.3-201ENST00000625906 87 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 TMEM30CP-203ENST00000637814 1035 ntBASIC5.26□□□□□ -1.57
PDS5AQ29RF7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDS5AQ29RF7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms