Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC079841.1-201ENST00000481228 950 ntBASIC3.77□□□□□ -1.81
USF2Q15853 RN7SL244P-201ENST00000493405 297 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC104971.1-201ENST00000495117 578 ntBASIC3.77□□□□□ -1.81
USF2Q15853 SNRPCP2-201ENST00000504370 475 ntBASIC3.77□□□□□ -1.81
USF2Q15853 HIGD1AP14-201ENST00000507617 282 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC110792.2-201ENST00000510278 224 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.77□□□□□ -1.81
USF2Q15853 RNU2-58P-201ENST00000516403 183 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.77□□□□□ -1.81
USF2Q15853 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.77□□□□□ -1.81
USF2Q15853 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 AP006289.1-201ENST00000538089 277 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
USF2Q15853 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.77□□□□□ -1.81
USF2Q15853 AL049874.4-201ENST00000557593 255 ntBASIC3.77□□□□□ -1.81
USF2Q15853 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 AC006270.2-201ENST00000578523 652 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
USF2Q15853 AC121761.2-201ENST00000617300 689 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC012414.7-202ENST00000622705 1090 ntBASIC3.77□□□□□ -1.81
USF2Q15853 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USF2Q15853 AC006065.5-201ENST00000623427 349 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AL049536.1-201ENST00000625043 744 ntBASIC3.77□□□□□ -1.81
USF2Q15853 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 THAP12P4-201ENST00000528321 2266 ntBASIC3.77□□□□□ -1.81
USF2Q15853 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USF2Q15853 AC008758.3-201ENST00000507003 1829 ntBASIC3.77□□□□□ -1.81
USF2Q15853 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.77□□□□□ -1.81
USF2Q15853 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.76□□□□□ -1.81
USF2Q15853 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USF2Q15853 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USF2Q15853 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 RNU1-83P-201ENST00000363426 164 ntBASIC3.76□□□□□ -1.81
USF2Q15853 RN7SKP103-201ENST00000363848 320 ntBASIC3.76□□□□□ -1.81
USF2Q15853 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 MIR105-2-201ENST00000385083 81 ntBASIC3.76□□□□□ -1.81
USF2Q15853 MIR1178-201ENST00000408396 91 ntBASIC3.76□□□□□ -1.81
USF2Q15853 U3.35-201ENST00000408405 208 ntBASIC3.76□□□□□ -1.81
USF2Q15853 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.76□□□□□ -1.81
USF2Q15853 RPL23AP26-201ENST00000412728 464 ntBASIC3.76□□□□□ -1.81
USF2Q15853 TBCAP2-201ENST00000416175 326 ntBASIC3.76□□□□□ -1.81
USF2Q15853 P2RY10P2-201ENST00000416730 913 ntBASIC3.76□□□□□ -1.81
USF2Q15853 BMS1P13-201ENST00000417301 885 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC093698.1-201ENST00000423843 571 ntBASIC3.76□□□□□ -1.81
USF2Q15853 FAR2P4-202ENST00000425399 584 ntBASIC3.76□□□□□ -1.81
USF2Q15853 RPL21P43-201ENST00000425440 472 ntBASIC3.76□□□□□ -1.81
USF2Q15853 BRWD1P3-201ENST00000428816 390 ntBASIC3.76□□□□□ -1.81
USF2Q15853 BX119904.1-201ENST00000432026 348 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AL627308.1-201ENST00000435693 821 ntBASIC3.76□□□□□ -1.81
USF2Q15853 ARL5AP3-201ENST00000439327 386 ntBASIC3.76□□□□□ -1.81
USF2Q15853 CNOT7P2-201ENST00000441051 832 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 RPL37P6-202ENST00000464216 403 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC090114.3-201ENST00000479267 829 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC116562.1-201ENST00000485355 781 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 NDUFB4P9-201ENST00000511646 388 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.76□□□□□ -1.81
USF2Q15853 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 OR4C2P-201ENST00000530855 1064 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.76□□□□□ -1.81
USF2Q15853 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC3.76□□□□□ -1.81
USF2Q15853 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 CYCSP28-201ENST00000534284 321 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC092490.3-201ENST00000545370 572 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 AC079075.1-201ENST00000559543 878 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC087477.6-201ENST00000559595 843 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC3.76□□□□□ -1.81
USF2Q15853 AGGF1P8-201ENST00000562979 1000 ntBASIC3.76□□□□□ -1.81
USF2Q15853 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.76□□□□□ -1.81
USF2Q15853 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 MIR1269B-201ENST00000580405 75 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.76□□□□□ -1.81
USF2Q15853 MIR4691-201ENST00000583764 85 ntBASIC3.76□□□□□ -1.81
USF2Q15853 OR7E18P-201ENST00000592589 702 ntBASIC3.76□□□□□ -1.81
USF2Q15853 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.76□□□□□ -1.81
USF2Q15853 AC020914.4-201ENST00000597690 277 ntBASIC3.76□□□□□ -1.81
USF2Q15853 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC105429.2-201ENST00000610567 517 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AC023509.5-201ENST00000617434 807 ntBASIC3.76□□□□□ -1.81
USF2Q15853 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.76□□□□□ -1.81
USF2Q15853 MIR4727-201ENST00000622232 55 ntBASIC3.76□□□□□ -1.81
USF2Q15853 AL359715.5-201ENST00000623431 443 ntBASIC3.76□□□□□ -1.81
USF2Q15853 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USF2Q15853 EOGT-210ENST00000615922 1931 ntBASIC3.76□□□□□ -1.81
USF2Q15853 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms