Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 FHP1-201ENST00000442741 703 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 EIF4A1P11-201ENST00000451239 222 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 RPL7P32-201ENST00000457119 744 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC006463.2-201ENST00000473326 348 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.86□□□□□ -1.79
H3F3AP84243 AL592156.1-201ENST00000508758 304 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3AP84243 AC090281.1-201ENST00000523019 276 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC009643.1-201ENST00000532030 391 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.86□□□□□ -1.79
H3F3AP84243 AL109766.1-201ENST00000555080 552 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC090515.3-201ENST00000560431 315 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.86□□□□□ -1.79
H3F3AP84243 AC090948.2-201ENST00000607363 564 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
H3F3AP84243 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
H3F3AP84243 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.86□□□□□ -1.79
H3F3AP84243 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.86□□□□□ -1.79
H3F3AP84243 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3F3AP84243 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
H3F3AP84243 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
H3F3AP84243 HSPD1P11-201ENST00000508643 1702 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.85□□□□□ -1.79
H3F3AP84243 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
H3F3AP84243 RHOT1P2-201ENST00000366423 333 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 MIR93-201ENST00000385024 80 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 VN1R8P-201ENST00000407739 893 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 P2RY10P2-201ENST00000416730 913 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 RPL18P10-201ENST00000425606 538 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AC022022.1-201ENST00000430304 178 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 CBX1P1-201ENST00000440184 427 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.85□□□□□ -1.79
H3F3AP84243 H2AFZP6-201ENST00000444403 394 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 CASP3P1-201ENST00000446037 609 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.85□□□□□ -1.79
H3F3AP84243 AL035551.1-201ENST00000446931 348 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.85□□□□□ -1.79
H3F3AP84243 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.85□□□□□ -1.79
H3F3AP84243 RPL7P22-201ENST00000466005 733 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 RN7SL303P-201ENST00000469773 251 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 RN7SL691P-201ENST00000494487 301 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AC104164.2-201ENST00000496953 495 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AC010374.1-201ENST00000503762 1237 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.85□□□□□ -1.79
H3F3AP84243 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.85□□□□□ -1.79
H3F3AP84243 AC006064.5-201ENST00000541782 248 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.85□□□□□ -1.79
H3F3AP84243 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.85□□□□□ -1.79
H3F3AP84243 MIR4277-201ENST00000578298 84 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 MIR4284-201ENST00000578924 81 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.85□□□□□ -1.79
H3F3AP84243 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.85□□□□□ -1.79
H3F3AP84243 AL121890.3-201ENST00000618494 516 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AC074276.2-201ENST00000619891 348 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AC020763.5-201ENST00000623298 430 ntBASIC3.85□□□□□ -1.79
H3F3AP84243 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.85□□□□□ -1.79
H3F3AP84243 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3F3AP84243 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3F3AP84243 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.84□□□□□ -1.79
H3F3AP84243 RNU1-15P-201ENST00000353977 144 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 IGKV7-3-201ENST00000357453 298 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 RNU1-132P-201ENST00000364300 164 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3F3AP84243 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3F3AP84243 MIR708-201ENST00000390708 88 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AL583835.1-201ENST00000399570 407 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AL136131.1-201ENST00000406079 803 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AC011933.1-201ENST00000413334 321 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 RAC1P3-201ENST00000416129 580 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 MTCO1P51-201ENST00000427672 1060 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AC073335.1-201ENST00000427776 363 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.84□□□□□ -1.79
H3F3AP84243 AL138787.1-202ENST00000437804 898 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.84□□□□□ -1.79
H3F3AP84243 AC116533.1-201ENST00000459748 321 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 RPS20P4-201ENST00000461659 355 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 RPL35P6-201ENST00000490024 372 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 BNIP3P41-201ENST00000503774 571 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.84□□□□□ -1.79
H3F3AP84243 PPBPP1-201ENST00000510807 373 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.84□□□□□ -1.79
H3F3AP84243 RAB9BP1-201ENST00000519581 626 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 AC090819.1-201ENST00000523800 1111 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3F3AP84243 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.84□□□□□ -1.79
H3F3AP84243 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.84□□□□□ -1.79
H3F3AP84243 AC096586.2-201ENST00000610260 441 ntBASIC3.84□□□□□ -1.79
H3F3AP84243 MIR6748-201ENST00000610433 71 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms