Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NKX6-1P78426 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NKX6-1P78426 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 HNRNPDP2-201ENST00000406475 478 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC068533.2-201ENST00000411872 306 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 USP9YP33-201ENST00000412220 421 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX6-1P78426 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AL031736.2-201ENST00000426573 787 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC099677.3-201ENST00000427081 395 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 USP9YP35-201ENST00000435696 412 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC129850.1-201ENST00000436203 508 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AL162739.1-201ENST00000450606 307 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 RPS4XP12-201ENST00000461747 709 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 PFN1P6-201ENST00000476786 399 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC072039.1-201ENST00000477611 581 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 RAP1BP2-201ENST00000478270 544 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 RN7SL809P-201ENST00000482040 297 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC108693.1-201ENST00000496068 432 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX6-1P78426 DUTP7-201ENST00000507982 486 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC136777.2-201ENST00000522979 358 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 SLC2A13P1-201ENST00000531560 322 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC023161.2-201ENST00000551218 780 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 VN1R92P-201ENST00000598511 928 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC123768.4-201ENST00000616244 701 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 AC018445.2-201ENST00000622987 260 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
NKX6-1P78426 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.12□□□□□ -1.59
NKX6-1P78426 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 XPOTP1-201ENST00000443317 2398 ntBASIC5.12□□□□□ -1.59
NKX6-1P78426 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.12□□□□□ -1.59
NKX6-1P78426 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
NKX6-1P78426 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 THAP12P9-201ENST00000503971 2360 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 RNA5SP46-201ENST00000362370 120 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 RNA5SP443-201ENST00000363083 132 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 RNU6-251P-201ENST00000363235 104 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX6-1P78426 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 Y_RNA.436-201ENST00000384097 102 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 SNORA70-201ENST00000384436 135 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 MIR506-201ENST00000384998 124 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NKX6-1P78426 RNU6-920P-201ENST00000410926 92 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 BTF3L4P1-201ENST00000413813 468 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC008280.1-201ENST00000418851 412 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 RPP40P1-201ENST00000426762 456 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.11□□□□□ -1.59
NKX6-1P78426 GAPDHP58-201ENST00000438477 1006 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AL117351.1-201ENST00000438864 766 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.11□□□□□ -1.59
NKX6-1P78426 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.11□□□□□ -1.59
NKX6-1P78426 AC073648.4-201ENST00000442655 781 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC073909.1-201ENST00000447112 999 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AL133445.1-201ENST00000467051 452 ntBASIC5.11□□□□□ -1.59
NKX6-1P78426 AC013828.1-201ENST00000481845 158 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms