Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNA1P78396 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNA1P78396 AF186190.1-201ENST00000517470 480 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNA1P78396 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNA1P78396 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNA1P78396 AP005212.4-201ENST00000614206 710 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 BNIP3P41-202ENST00000616656 861 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 AC015914.2-201ENST00000618167 288 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 AC100871.1-201ENST00000507871 1456 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 CASC19-284ENST00000642142 1868 ntBASIC5.04□□□□□ -1.6
CCNA1P78396 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNA1P78396 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNA1P78396 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCNA1P78396 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 RPS27AP11-201ENST00000402798 447 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNA1P78396 CEACAMP8-201ENST00000413902 580 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 RPL6P29-201ENST00000414863 865 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 ARAFP1-201ENST00000422172 605 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 APOOP2-201ENST00000461561 539 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 CCDC75P1-201ENST00000469247 791 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 AC010374.1-201ENST00000503762 1237 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNA1P78396 SAP18P1-201ENST00000512058 390 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNA1P78396 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNA1P78396 MTCO1P49-201ENST00000523429 802 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNA1P78396 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 PDCD5P1-201ENST00000543528 309 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNA1P78396 AC022916.3-201ENST00000592961 742 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AC245389.1-201ENST00000605141 529 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AC007620.3-201ENST00000608131 497 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNA1P78396 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCNA1P78396 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNA1P78396 AC017104.4-201ENST00000636283 1592 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 LINC01109-201ENST00000603837 3081 ntBASIC5.03□□□□□ -1.6
CCNA1P78396 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
CCNA1P78396 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNA1P78396 AL122126.1-201ENST00000546905 1318 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCNA1P78396 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCNA1P78396 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
CCNA1P78396 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNA1P78396 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNA1P78396 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNA1P78396 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC010740.1-201ENST00000417035 684 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNA1P78396 YY1P1-201ENST00000427625 668 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 RPS20P1-201ENST00000434853 354 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNA1P78396 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNA1P78396 VN1R32P-201ENST00000452234 905 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 TPT1P1-201ENST00000458495 518 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC020890.1-201ENST00000491837 504 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 RN7SL691P-201ENST00000494487 301 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNA1P78396 AL592156.1-201ENST00000508758 304 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNA1P78396 MTND4LP31-201ENST00000514859 294 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 RNA5SP49-201ENST00000516450 115 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNA1P78396 AC015912.2-201ENST00000571053 181 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC090312.1-201ENST00000580637 348 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 MIR4286-201ENST00000580651 93 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.02□□□□□ -1.61
CCNA1P78396 AC091178.1-203ENST00000584586 279 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 HMGB2P1-201ENST00000591146 634 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC006116.5-201ENST00000591936 559 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC130352.1-201ENST00000602979 661 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AC133552.5-201ENST00000604266 540 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 OR7M1P-201ENST00000608946 533 ntBASIC5.02□□□□□ -1.61
CCNA1P78396 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.02□□□□□ -1.61
CCNA1P78396 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCNA1P78396 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNA1P78396 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCNA1P78396 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCNA1P78396 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms