Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKP1P63208 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.22□□□□□ -1.73
SKP1P63208 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKP1P63208 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SKP1P63208 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
SKP1P63208 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.21□□□□□ -1.73
SKP1P63208 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SKP1P63208 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.21□□□□□ -1.74
SKP1P63208 AL078604.1-201ENST00000404609 466 ntBASIC4.21□□□□□ -1.74
SKP1P63208 OR2X1P-201ENST00000421144 687 ntBASIC4.21□□□□□ -1.74
SKP1P63208 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.21□□□□□ -1.74
SKP1P63208 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.21□□□□□ -1.74
SKP1P63208 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SKP1P63208 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 RPL7P31-201ENST00000450192 724 ntBASIC4.21□□□□□ -1.74
SKP1P63208 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 HMGB3P21-201ENST00000452483 547 ntBASIC4.21□□□□□ -1.74
SKP1P63208 RNU6-1218P-201ENST00000458990 108 ntBASIC4.21□□□□□ -1.74
SKP1P63208 RPL21P126-201ENST00000470049 478 ntBASIC4.21□□□□□ -1.74
SKP1P63208 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SKP1P63208 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 AC090151.1-201ENST00000520784 730 ntBASIC4.21□□□□□ -1.74
SKP1P63208 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.21□□□□□ -1.74
SKP1P63208 AC009643.1-201ENST00000532030 391 ntBASIC4.21□□□□□ -1.74
SKP1P63208 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.21□□□□□ -1.74
SKP1P63208 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.21□□□□□ -1.74
SKP1P63208 AC079587.1-201ENST00000603846 277 ntBASIC4.21□□□□□ -1.74
SKP1P63208 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.21□□□□□ -1.74
SKP1P63208 AC009318.3-201ENST00000616916 503 ntBASIC4.21□□□□□ -1.74
SKP1P63208 uc_338.13-201ENST00000618243 179 ntBASIC4.21□□□□□ -1.74
SKP1P63208 AC007546.2-201ENST00000623996 360 ntBASIC4.21□□□□□ -1.74
SKP1P63208 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.21□□□□□ -1.74
SKP1P63208 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SKP1P63208 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SKP1P63208 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SKP1P63208 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SKP1P63208 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SKP1P63208 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SKP1P63208 OR11H5P-202ENST00000641612 1325 ntBASIC4.21□□□□□ -1.74
SKP1P63208 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 MFSD8-216ENST00000641147 4009 ntBASIC4.2□□□□□ -1.74
SKP1P63208 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.2□□□□□ -1.74
SKP1P63208 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SKP1P63208 OR4K17-201ENST00000315543 1032 ntBASIC4.2□□□□□ -1.74
SKP1P63208 RNA5SP502-201ENST00000362694 119 ntBASIC4.2□□□□□ -1.74
SKP1P63208 RNA5SP447-201ENST00000363749 119 ntBASIC4.2□□□□□ -1.74
SKP1P63208 ELOCP19-201ENST00000411919 318 ntBASIC4.2□□□□□ -1.74
SKP1P63208 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.2□□□□□ -1.74
SKP1P63208 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.2□□□□□ -1.74
SKP1P63208 PHBP16-201ENST00000446318 950 ntBASIC4.2□□□□□ -1.74
SKP1P63208 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.2□□□□□ -1.74
SKP1P63208 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.2□□□□□ -1.74
SKP1P63208 RN7SL481P-201ENST00000477764 299 ntBASIC4.2□□□□□ -1.74
SKP1P63208 AC010627.1-201ENST00000503819 1294 ntBASIC4.2□□□□□ -1.74
SKP1P63208 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 GSTP1P1-201ENST00000548078 319 ntBASIC4.2□□□□□ -1.74
SKP1P63208 AC007620.3-201ENST00000608131 497 ntBASIC4.2□□□□□ -1.74
SKP1P63208 AC020634.1-201ENST00000608701 549 ntBASIC4.2□□□□□ -1.74
SKP1P63208 AC000123.2-201ENST00000623124 461 ntBASIC4.2□□□□□ -1.74
SKP1P63208 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SKP1P63208 USP9YP4-201ENST00000424401 1745 ntBASIC4.2□□□□□ -1.74
SKP1P63208 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKP1P63208 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.2□□□□□ -1.74
SKP1P63208 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKP1P63208 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SKP1P63208 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.19□□□□□ -1.74
SKP1P63208 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKP1P63208 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SKP1P63208 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SKP1P63208 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.19□□□□□ -1.74
SKP1P63208 RNA5SP22-201ENST00000365393 109 ntBASIC4.19□□□□□ -1.74
SKP1P63208 RNU6-167P-201ENST00000384292 106 ntBASIC4.19□□□□□ -1.74
SKP1P63208 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.19□□□□□ -1.74
SKP1P63208 AL035696.2-201ENST00000407941 709 ntBASIC4.19□□□□□ -1.74
SKP1P63208 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.19□□□□□ -1.74
SKP1P63208 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.19□□□□□ -1.74
SKP1P63208 ARAFP1-201ENST00000422172 605 ntBASIC4.19□□□□□ -1.74
SKP1P63208 RPEP3-201ENST00000425462 676 ntBASIC4.19□□□□□ -1.74
SKP1P63208 CYCSP42-201ENST00000450823 238 ntBASIC4.19□□□□□ -1.74
SKP1P63208 CALM1P2-201ENST00000452941 448 ntBASIC4.19□□□□□ -1.74
SKP1P63208 PSMC1P13-201ENST00000458195 985 ntBASIC4.19□□□□□ -1.74
SKP1P63208 RPL23AP24-201ENST00000458203 385 ntBASIC4.19□□□□□ -1.74
SKP1P63208 RN7SL98P-201ENST00000462271 300 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms