Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL138478.1-201ENST00000612252 832 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AL158163.2-201ENST00000619110 700 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 AP002505.2-201ENST00000623585 696 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AC135068.5-201ENST00000624197 983 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC104454.1-201ENST00000421341 1401 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 RBPJP2-201ENST00000618187 1444 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
SEC61A1P61619 AC007342.5-201ENST00000571340 2142 ntBASIC4.51□□□□□ -1.69
SEC61A1P61619 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A1P61619 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SEC61A1P61619 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SEC61A1P61619 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 LINC01355-201ENST00000566551 5444 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 ANKRD36P1-201ENST00000344424 659 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 RNU4-92P-201ENST00000363783 136 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 RNU6-185P-201ENST00000384421 107 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 SNORA11B-201ENST00000408175 129 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC013404.1-201ENST00000413068 249 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 RPS7P9-201ENST00000414704 586 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 SLC35E1P1-201ENST00000419313 864 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AL139148.1-201ENST00000427122 680 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 FAM96AP1-201ENST00000430879 482 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 OR52B5P-201ENST00000435337 951 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A1P61619 RPL35AP21-201ENST00000437667 333 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 GSTA7P-201ENST00000438425 448 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 CNOT7P2-201ENST00000441051 832 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 RPL34P26-201ENST00000445636 354 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A1P61619 FAR2P1-206ENST00000449736 709 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 OTX2P1-201ENST00000450956 354 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 AL133244.1-201ENST00000456007 258 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 RN7SL172P-201ENST00000460535 303 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 RPL7P48-201ENST00000461513 746 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 RN7SL727P-201ENST00000482164 296 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC006499.3-201ENST00000506077 748 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 HMGB1P19-201ENST00000517578 577 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 HMGB1P40-201ENST00000525121 540 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AP000926.4-201ENST00000527351 454 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 MTND2P26-201ENST00000528255 1029 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A1P61619 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SEC61A1P61619 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 OR11J2P-201ENST00000555298 907 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A1P61619 RN7SL356P-201ENST00000582228 248 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A1P61619 AL020997.3-201ENST00000602843 359 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AL392112.1-201ENST00000605115 829 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC090525.3-201ENST00000605601 189 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC090116.1-201ENST00000615679 446 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC011472.4-201ENST00000615848 491 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC016769.4-201ENST00000616893 535 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 AP003400.3-201ENST00000624904 346 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 CYP4F35P-202ENST00000636121 390 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 AC073869.7-201ENST00000640874 297 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 OR52B5P-202ENST00000641118 1110 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A1P61619 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 AC011493.1-201ENST00000596753 1632 ntBASIC4.5□□□□□ -1.69
SEC61A1P61619 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A1P61619 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SEC61A1P61619 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.49□□□□□ -1.69
SEC61A1P61619 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SEC61A1P61619 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms