Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PGAM1P13-201ENST00000507497 754 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 HIGD1AP14-201ENST00000507617 282 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 HPRT1P1-201ENST00000509498 657 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.8□□□□□ -1.64
RPS3AP61247 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPS3AP61247 AC022360.1-201ENST00000521058 340 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.8□□□□□ -1.64
RPS3AP61247 AC084757.1-201ENST00000559987 490 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 RPL10P14-201ENST00000565265 298 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.8□□□□□ -1.64
RPS3AP61247 AC069307.1-201ENST00000602820 447 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 RPAP2P1-201ENST00000603626 1168 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.8□□□□□ -1.64
RPS3AP61247 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.8□□□□□ -1.64
RPS3AP61247 AL121612.2-201ENST00000612261 482 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 uc_338.18-201ENST00000615451 175 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 AC243756.2-201ENST00000618406 463 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 MIR6839-201ENST00000620425 113 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS3AP61247 OR4G3P-201ENST00000633500 913 ntBASIC4.8□□□□□ -1.64
RPS3AP61247 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.8□□□□□ -1.64
RPS3AP61247 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPS3AP61247 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS3AP61247 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RPS3AP61247 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RPS3AP61247 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS3AP61247 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPS3AP61247 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPS3AP61247 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPS3AP61247 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 IL6STP1-201ENST00000346911 1020 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPS3AP61247 RN7SKP153-201ENST00000365026 316 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPS3AP61247 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.79□□□□□ -1.64
RPS3AP61247 AL121834.1-202ENST00000404494 277 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 HNRNPDP2-201ENST00000406475 478 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 RNU4-34P-201ENST00000410431 124 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 RNA5SP146-201ENST00000410743 123 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.79□□□□□ -1.64
RPS3AP61247 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 CEACAMP1-201ENST00000434624 1035 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RPS3AP61247 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 AC079841.1-201ENST00000481228 950 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.79□□□□□ -1.64
RPS3AP61247 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 FTH1P24-201ENST00000503502 462 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 AC006499.3-201ENST00000506077 748 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AC021146.3-201ENST00000511911 260 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 SNORA19.3-201ENST00000516165 130 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RPS3AP61247 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.79□□□□□ -1.64
RPS3AP61247 LRRC6P1-201ENST00000532188 885 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.79□□□□□ -1.64
RPS3AP61247 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 HAUS8P1-201ENST00000549005 542 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 NIFKP8-201ENST00000560500 874 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.79□□□□□ -1.64
RPS3AP61247 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.79□□□□□ -1.64
RPS3AP61247 MIR4512-201ENST00000583257 77 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.79□□□□□ -1.64
RPS3AP61247 AC126915.2-201ENST00000610957 190 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 SDR42E1P1-201ENST00000611327 477 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 VN1R7P-201ENST00000619242 903 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 AP002505.2-201ENST00000623585 696 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AP003400.3-201ENST00000624904 346 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 AL109659.3-201ENST00000624985 950 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 CYP4F35P-202ENST00000636121 390 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPS3AP61247 AC138393.1-206ENST00000540997 1886 ntBASIC4.79□□□□□ -1.64
RPS3AP61247 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.79□□□□□ -1.64
RPS3AP61247 AC111188.2-201ENST00000529697 1387 ntBASIC4.78□□□□□ -1.64
RPS3AP61247 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RPS3AP61247 TLK1P1-201ENST00000456760 2440 ntBASIC4.78□□□□□ -1.64
RPS3AP61247 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RPS3AP61247 AC007529.1-201ENST00000418574 2178 ntBASIC4.78□□□□□ -1.64
RPS3AP61247 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.78□□□□□ -1.64
RPS3AP61247 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms