Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 PTGES3P1-201ENST00000439531 483 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN20P56880 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 ELOCP16-201ENST00000444494 332 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 USP9YP17-201ENST00000444617 696 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AL354714.3-201ENST00000447284 493 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 TCEA1P1-201ENST00000449716 880 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC098826.2-201ENST00000452011 651 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 RPL7AP52-201ENST00000458096 790 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC005412.2-201ENST00000492004 341 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC073073.1-201ENST00000493920 463 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 RPL21P131-201ENST00000497298 483 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC104108.1-201ENST00000509930 412 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 TCP11X3P-202ENST00000514289 1254 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 RN7SKP265-201ENST00000516448 223 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN20P56880 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 OR1F2P-201ENST00000570470 933 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 BNIP3P32-201ENST00000600015 554 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 MEMO1P5-201ENST00000604810 406 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AL365400.2-201ENST00000605604 902 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC106052.1-201ENST00000608029 497 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC097505.1-201ENST00000610199 565 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC004232.3-201ENST00000622977 525 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.54□□□□□ -1.68
CLDN20P56880 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.54□□□□□ -1.68
CLDN20P56880 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLDN20P56880 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 AC131971.1-201ENST00000332881 1482 ntBASIC4.54□□□□□ -1.68
CLDN20P56880 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLDN20P56880 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLDN20P56880 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.54□□□□□ -1.68
CLDN20P56880 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
CLDN20P56880 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLDN20P56880 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 ANKRD36P1-201ENST00000344424 659 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 AC092745.2-202ENST00000411880 369 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CLDN20P56880 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 AL590762.4-201ENST00000425885 253 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN20P56880 COX6CP13-201ENST00000428703 226 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 HMGB3P5-201ENST00000428894 612 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 FABP7P2-201ENST00000429946 379 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 MTCO3P21-201ENST00000430791 643 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 GTF2IP3-201ENST00000433887 494 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 AC002542.1-201ENST00000440683 193 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 OR10R1P-201ENST00000441524 1141 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC068135.1-201ENST00000446164 246 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CLDN20P56880 EIF2S2P2-201ENST00000447161 982 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AL356981.1-201ENST00000454879 684 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC020699.1-201ENST00000505161 445 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN20P56880 AC113420.1-201ENST00000507903 571 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 AC008565.1-201ENST00000509046 885 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLDN20P56880 PRELID3BP4-201ENST00000515476 571 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN20P56880 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN20P56880 OR5AZ1P-201ENST00000527448 943 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN20P56880 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 NMNAT1P1-201ENST00000554095 876 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 MIR4436B2-201ENST00000581415 91 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 MIR4436B1-201ENST00000583272 91 ntBASIC4.53□□□□□ -1.68
CLDN20P56880 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
CLDN20P56880 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.53□□□□□ -1.68
CLDN20P56880 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms