Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.3□□□□□ -1.88
CMC4P56277 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 RPL6P29-201ENST00000414863 865 ntBASIC3.3□□□□□ -1.88
CMC4P56277 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 P2RY10P2-201ENST00000416730 913 ntBASIC3.3□□□□□ -1.88
CMC4P56277 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 AC069213.2-201ENST00000420238 366 ntBASIC3.3□□□□□ -1.88
CMC4P56277 RPL7AP25-201ENST00000423357 805 ntBASIC3.3□□□□□ -1.88
CMC4P56277 RNF19BPX-201ENST00000426224 625 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.3□□□□□ -1.88
CMC4P56277 MRPS33P4-201ENST00000434892 317 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC092013.1-201ENST00000438795 332 ntBASIC3.3□□□□□ -1.88
CMC4P56277 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.3□□□□□ -1.88
CMC4P56277 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 AC245517.2-201ENST00000442890 346 ntBASIC3.3□□□□□ -1.88
CMC4P56277 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CMC4P56277 RPL7L1P1-201ENST00000448259 785 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 METTL15P1-201ENST00000481421 1045 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 AC008897.1-201ENST00000494006 347 ntBASIC3.3□□□□□ -1.88
CMC4P56277 RPS4XP18-201ENST00000495480 763 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 AC093720.1-201ENST00000505681 714 ntBASIC3.3□□□□□ -1.88
CMC4P56277 ATP1B1P1-201ENST00000509767 915 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.3□□□□□ -1.88
CMC4P56277 AC009643.1-201ENST00000532030 391 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.3□□□□□ -1.88
CMC4P56277 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 AC018552.3-201ENST00000567416 561 ntBASIC3.3□□□□□ -1.88
CMC4P56277 MIR5096-201ENST00000583713 70 ntBASIC3.3□□□□□ -1.88
CMC4P56277 MIR4715-201ENST00000584117 79 ntBASIC3.3□□□□□ -1.88
CMC4P56277 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 AL133406.3-201ENST00000606817 541 ntBASIC3.3□□□□□ -1.88
CMC4P56277 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.3□□□□□ -1.88
CMC4P56277 AP000346.3-201ENST00000622821 210 ntBASIC3.3□□□□□ -1.88
CMC4P56277 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 AL137100.1-201ENST00000556703 1620 ntBASIC3.3□□□□□ -1.88
CMC4P56277 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 RNA5SP28-201ENST00000363841 119 ntBASIC3.29□□□□□ -1.88
CMC4P56277 RNA5SP505-201ENST00000364748 108 ntBASIC3.29□□□□□ -1.88
CMC4P56277 MIR421-201ENST00000365696 85 ntBASIC3.29□□□□□ -1.88
CMC4P56277 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 MIR195-201ENST00000385194 87 ntBASIC3.29□□□□□ -1.88
CMC4P56277 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CMC4P56277 RNA5SP372-201ENST00000390836 115 ntBASIC3.29□□□□□ -1.88
CMC4P56277 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.29□□□□□ -1.88
CMC4P56277 RNA5SP498-201ENST00000411342 120 ntBASIC3.29□□□□□ -1.88
CMC4P56277 EIF4A1P3-201ENST00000411521 244 ntBASIC3.29□□□□□ -1.88
CMC4P56277 RPS20P14-201ENST00000412545 360 ntBASIC3.29□□□□□ -1.88
CMC4P56277 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.29□□□□□ -1.88
CMC4P56277 OR6C64P-201ENST00000419708 825 ntBASIC3.29□□□□□ -1.88
CMC4P56277 PDSS1P1-201ENST00000422953 1114 ntBASIC3.29□□□□□ -1.88
CMC4P56277 AC023141.6-201ENST00000429418 337 ntBASIC3.29□□□□□ -1.88
CMC4P56277 MTND6P18-201ENST00000439477 513 ntBASIC3.29□□□□□ -1.88
CMC4P56277 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 AC023512.1-201ENST00000444513 499 ntBASIC3.29□□□□□ -1.88
CMC4P56277 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 EIF4A1P11-201ENST00000451239 222 ntBASIC3.29□□□□□ -1.88
CMC4P56277 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 RN7SL98P-201ENST00000462271 300 ntBASIC3.29□□□□□ -1.88
CMC4P56277 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 RPL21P126-201ENST00000470049 478 ntBASIC3.29□□□□□ -1.88
CMC4P56277 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.29□□□□□ -1.88
CMC4P56277 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 AC021087.2-201ENST00000504656 1203 ntBASIC3.29□□□□□ -1.88
CMC4P56277 FABP5P6-201ENST00000510588 409 ntBASIC3.29□□□□□ -1.88
CMC4P56277 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 RAB9BP1-201ENST00000519581 626 ntBASIC3.29□□□□□ -1.88
CMC4P56277 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CMC4P56277 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.29□□□□□ -1.88
CMC4P56277 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.29□□□□□ -1.88
CMC4P56277 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms