Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 ATP5F1P2-201ENST00000398143 760 ntBASIC4.92□□□□□ -1.62
VCPP55072 AMZ2P2-201ENST00000406819 1057 ntBASIC4.92□□□□□ -1.62
VCPP55072 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.92□□□□□ -1.62
VCPP55072 ARAFP1-201ENST00000422172 605 ntBASIC4.92□□□□□ -1.62
VCPP55072 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.92□□□□□ -1.62
VCPP55072 CYCSP11-201ENST00000436426 315 ntBASIC4.92□□□□□ -1.62
VCPP55072 RPL7AP52-201ENST00000458096 790 ntBASIC4.92□□□□□ -1.62
VCPP55072 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.92□□□□□ -1.62
VCPP55072 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.92□□□□□ -1.62
VCPP55072 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.92□□□□□ -1.62
VCPP55072 AC025884.1-201ENST00000556034 378 ntBASIC4.92□□□□□ -1.62
VCPP55072 AL121834.1-201ENST00000572284 509 ntBASIC4.92□□□□□ -1.62
VCPP55072 AC130352.1-201ENST00000602979 661 ntBASIC4.92□□□□□ -1.62
VCPP55072 BNIP3P11-201ENST00000603878 563 ntBASIC4.92□□□□□ -1.62
VCPP55072 AC012213.4-201ENST00000606457 354 ntBASIC4.92□□□□□ -1.62
VCPP55072 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.92□□□□□ -1.62
VCPP55072 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.92□□□□□ -1.62
VCPP55072 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.92□□□□□ -1.62
VCPP55072 AC004777.1-201ENST00000624317 287 ntBASIC4.92□□□□□ -1.62
VCPP55072 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.92□□□□□ -1.62
VCPP55072 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.92□□□□□ -1.62
VCPP55072 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.92□□□□□ -1.62
VCPP55072 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VCPP55072 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VCPP55072 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.92□□□□□ -1.62
VCPP55072 Z95327.2-201ENST00000414579 1873 ntBASIC4.92□□□□□ -1.62
VCPP55072 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VCPP55072 AL672167.1-203ENST00000641299 2975 ntBASIC4.92□□□□□ -1.62
VCPP55072 CASC19-204ENST00000641001 2055 ntBASIC4.92□□□□□ -1.62
VCPP55072 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.92□□□□□ -1.62
VCPP55072 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.91□□□□□ -1.62
VCPP55072 AC110792.3-201ENST00000595906 1614 ntBASIC4.91□□□□□ -1.62
VCPP55072 AC090971.4-201ENST00000560291 1800 ntBASIC4.91□□□□□ -1.62
VCPP55072 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.91□□□□□ -1.62
VCPP55072 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.91□□□□□ -1.62
VCPP55072 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 SNORD96B-201ENST00000386148 79 ntBASIC4.91□□□□□ -1.62
VCPP55072 RPS26P8-201ENST00000393490 348 ntBASIC4.91□□□□□ -1.62
VCPP55072 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 GLUD1P9-201ENST00000420997 1173 ntBASIC4.91□□□□□ -1.62
VCPP55072 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.91□□□□□ -1.62
VCPP55072 AL162591.2-201ENST00000449634 317 ntBASIC4.91□□□□□ -1.62
VCPP55072 AC079168.2-201ENST00000453977 416 ntBASIC4.91□□□□□ -1.62
VCPP55072 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.91□□□□□ -1.62
VCPP55072 RPS4XP18-201ENST00000495480 763 ntBASIC4.91□□□□□ -1.62
VCPP55072 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.91□□□□□ -1.62
VCPP55072 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.91□□□□□ -1.62
VCPP55072 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.91□□□□□ -1.62
VCPP55072 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.91□□□□□ -1.62
VCPP55072 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.91□□□□□ -1.62
VCPP55072 AC090312.1-201ENST00000580637 348 ntBASIC4.91□□□□□ -1.62
VCPP55072 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.91□□□□□ -1.62
VCPP55072 COX6CP4-201ENST00000605798 228 ntBASIC4.91□□□□□ -1.62
VCPP55072 AP000843.1-201ENST00000624880 701 ntBASIC4.91□□□□□ -1.62
VCPP55072 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.91□□□□□ -1.62
VCPP55072 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.91□□□□□ -1.62
VCPP55072 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.91□□□□□ -1.62
VCPP55072 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
VCPP55072 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VCPP55072 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
VCPP55072 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.9□□□□□ -1.62
VCPP55072 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VCPP55072 AC025031.4-201ENST00000621248 3271 ntBASIC4.9□□□□□ -1.62
VCPP55072 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VCPP55072 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.9□□□□□ -1.63
VCPP55072 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VCPP55072 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.9□□□□□ -1.63
VCPP55072 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.9□□□□□ -1.63
VCPP55072 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.9□□□□□ -1.63
VCPP55072 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.9□□□□□ -1.63
VCPP55072 RAD1P2-201ENST00000446414 663 ntBASIC4.9□□□□□ -1.63
VCPP55072 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.9□□□□□ -1.63
VCPP55072 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.9□□□□□ -1.63
VCPP55072 APOOP2-201ENST00000461561 539 ntBASIC4.9□□□□□ -1.63
VCPP55072 RN7SL303P-201ENST00000469773 251 ntBASIC4.9□□□□□ -1.63
VCPP55072 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.9□□□□□ -1.63
VCPP55072 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.9□□□□□ -1.63
VCPP55072 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.9□□□□□ -1.63
VCPP55072 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.9□□□□□ -1.63
VCPP55072 PDCD5P1-201ENST00000543528 309 ntBASIC4.9□□□□□ -1.63
VCPP55072 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.9□□□□□ -1.63
VCPP55072 AC015912.2-201ENST00000571053 181 ntBASIC4.9□□□□□ -1.63
VCPP55072 AC007620.3-201ENST00000608131 497 ntBASIC4.9□□□□□ -1.63
VCPP55072 AC019131.2-201ENST00000609071 870 ntBASIC4.9□□□□□ -1.63
VCPP55072 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.9□□□□□ -1.63
VCPP55072 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.9□□□□□ -1.63
VCPP55072 BX005019.1-201ENST00000561881 1810 ntBASIC4.9□□□□□ -1.63
VCPP55072 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.9□□□□□ -1.63
VCPP55072 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VCPP55072 OR51C1P-202ENST00000641159 1444 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms