Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.88□□□□□ -1.63
LIMK1P53667 FO393419.3-201ENST00000428741 282 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.88□□□□□ -1.63
LIMK1P53667 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.88□□□□□ -1.63
LIMK1P53667 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.88□□□□□ -1.63
LIMK1P53667 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 RN7SL443P-201ENST00000464331 290 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 NPM1P17-201ENST00000479221 602 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AC022133.1-201ENST00000490961 571 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 RPS24P16-201ENST00000497294 392 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.88□□□□□ -1.63
LIMK1P53667 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.88□□□□□ -1.63
LIMK1P53667 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.88□□□□□ -1.63
LIMK1P53667 AC023575.1-201ENST00000580510 358 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 KPNA2P3-201ENST00000584190 848 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 RPL12P25-202ENST00000598100 674 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AC090525.3-201ENST00000605601 189 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AP005432.2-201ENST00000608162 586 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 AC011472.4-201ENST00000615848 491 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.88□□□□□ -1.63
LIMK1P53667 FRG1DP-201ENST00000635586 771 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 MIR6715B-201ENST00000637172 77 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 OR56B2P-202ENST00000641377 2453 ntBASIC4.88□□□□□ -1.63
LIMK1P53667 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.88□□□□□ -1.63
LIMK1P53667 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIMK1P53667 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LIMK1P53667 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.88□□□□□ -1.63
LIMK1P53667 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 AC007390.2-201ENST00000606229 3803 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.87□□□□□ -1.63
LIMK1P53667 RNU6-452P-201ENST00000384406 107 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 MIR134-201ENST00000385258 73 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AL591848.1-201ENST00000413092 322 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AL450992.3-201ENST00000413192 568 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.87□□□□□ -1.63
LIMK1P53667 RPS27AP12-201ENST00000429552 465 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AC124944.2-201ENST00000429866 1242 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC016831.4-201ENST00000438302 307 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 ARL2BPP10-201ENST00000446487 531 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AL359073.1-201ENST00000448036 403 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 CEACAMP6-201ENST00000452007 574 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 MTND2P28-201ENST00000457540 1044 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 RPL7P48-201ENST00000461513 746 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC109327.1-201ENST00000471666 403 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.87□□□□□ -1.63
LIMK1P53667 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.87□□□□□ -1.63
LIMK1P53667 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC022884.2-201ENST00000578535 580 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC098483.2-201ENST00000603158 454 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AC005377.1-201ENST00000605126 456 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AC022106.2-201ENST00000620114 757 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AC000123.2-201ENST00000623124 461 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 OR51H2P-202ENST00000641424 3046 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 DDX18P4-201ENST00000511690 1966 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC010928.1-201ENST00000592477 1447 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.87□□□□□ -1.63
LIMK1P53667 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LIMK1P53667 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LIMK1P53667 AC011447.7-201ENST00000624228 1590 ntBASIC4.87□□□□□ -1.63
LIMK1P53667 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.86□□□□□ -1.63
LIMK1P53667 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LIMK1P53667 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
LIMK1P53667 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.86□□□□□ -1.63
LIMK1P53667 SNORA37-201ENST00000384504 129 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms