Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL445665.1-202ENST00000452436 324 ntBASIC6.62□□□□□ -1.35
USP11P51784 AC093166.4-201ENST00000457867 318 ntBASIC6.62□□□□□ -1.35
USP11P51784 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 AC079841.1-201ENST00000481228 950 ntBASIC6.62□□□□□ -1.35
USP11P51784 VPS26AP1-201ENST00000483197 979 ntBASIC6.62□□□□□ -1.35
USP11P51784 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 NDUFA5P12-201ENST00000503796 343 ntBASIC6.62□□□□□ -1.35
USP11P51784 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 OR5AK1P-201ENST00000524837 922 ntBASIC6.62□□□□□ -1.35
USP11P51784 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC069209.1-201ENST00000619282 651 ntBASIC6.62□□□□□ -1.35
USP11P51784 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
USP11P51784 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.62□□□□□ -1.35
USP11P51784 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
USP11P51784 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.62□□□□□ -1.35
USP11P51784 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
USP11P51784 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 AC103591.2-201ENST00000265259 766 ntBASIC6.61□□□□□ -1.35
USP11P51784 RNU6-374P-201ENST00000364146 108 ntBASIC6.61□□□□□ -1.35
USP11P51784 Y_RNA.302-201ENST00000364997 102 ntBASIC6.61□□□□□ -1.35
USP11P51784 Y_RNA.311-201ENST00000365068 96 ntBASIC6.61□□□□□ -1.35
USP11P51784 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.61□□□□□ -1.35
USP11P51784 AC017078.1-201ENST00000416146 368 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC073410.1-201ENST00000435125 589 ntBASIC6.61□□□□□ -1.35
USP11P51784 RBM43P1-201ENST00000476891 1081 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC079080.1-201ENST00000479841 822 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC006539.1-201ENST00000481419 501 ntBASIC6.61□□□□□ -1.35
USP11P51784 HMGB1P44-201ENST00000508597 572 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC091133.4-201ENST00000511142 308 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.61□□□□□ -1.35
USP11P51784 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.61□□□□□ -1.35
USP11P51784 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.61□□□□□ -1.35
USP11P51784 TRIM51DP-201ENST00000529746 596 ntBASIC6.61□□□□□ -1.35
USP11P51784 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
USP11P51784 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.61□□□□□ -1.35
USP11P51784 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 RBM22P12-201ENST00000567098 1255 ntBASIC6.61□□□□□ -1.35
USP11P51784 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.61□□□□□ -1.35
USP11P51784 AP000894.4-201ENST00000610185 483 ntBASIC6.61□□□□□ -1.35
USP11P51784 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 AC138649.3-201ENST00000622154 254 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC011815.3-201ENST00000624194 473 ntBASIC6.61□□□□□ -1.35
USP11P51784 AC124864.2-201ENST00000624736 186 ntBASIC6.61□□□□□ -1.35
USP11P51784 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
USP11P51784 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.61□□□□□ -1.35
USP11P51784 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.61□□□□□ -1.35
USP11P51784 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.61□□□□□ -1.35
USP11P51784 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
USP11P51784 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
USP11P51784 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
USP11P51784 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USP11P51784 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USP11P51784 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
USP11P51784 AC106872.5-201ENST00000508856 1416 ntBASIC6.6□□□□□ -1.35
USP11P51784 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.6□□□□□ -1.35
USP11P51784 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
USP11P51784 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
USP11P51784 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USP11P51784 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
USP11P51784 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USP11P51784 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
USP11P51784 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
USP11P51784 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms