Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC016027.5-201ENST00000427227 210 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC094019.1-201ENST00000434678 472 ntBASIC6.36□□□□□ -1.39
LIG3P49916 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG3P49916 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG3P49916 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 snoU109.1-201ENST00000459339 135 ntBASIC6.36□□□□□ -1.39
LIG3P49916 RN7SL369P-201ENST00000477138 299 ntBASIC6.36□□□□□ -1.39
LIG3P49916 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG3P49916 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
LIG3P49916 RPL12P31-201ENST00000478433 450 ntBASIC6.36□□□□□ -1.39
LIG3P49916 RN7SL714P-201ENST00000487050 298 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC090638.1-201ENST00000498296 909 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC108941.1-201ENST00000502853 530 ntBASIC6.36□□□□□ -1.39
LIG3P49916 MTCYBP17-201ENST00000503579 789 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 AC025674.1-201ENST00000507074 324 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 MTND5P4-201ENST00000514978 288 ntBASIC6.36□□□□□ -1.39
LIG3P49916 SCARNA6.1-201ENST00000516989 238 ntBASIC6.36□□□□□ -1.39
LIG3P49916 COX6B1P4-201ENST00000519826 484 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.36□□□□□ -1.39
LIG3P49916 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG3P49916 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG3P49916 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.36□□□□□ -1.39
LIG3P49916 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.36□□□□□ -1.39
LIG3P49916 AC005332.4-201ENST00000592752 579 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG3P49916 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.36□□□□□ -1.39
LIG3P49916 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG3P49916 AC072046.2-201ENST00000618366 268 ntBASIC6.36□□□□□ -1.39
LIG3P49916 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG3P49916 AC093591.3-201ENST00000634516 308 ntBASIC6.36□□□□□ -1.39
LIG3P49916 CRYM-AS1-204ENST00000637983 556 ntBASIC6.36□□□□□ -1.39
LIG3P49916 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIG3P49916 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG3P49916 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
LIG3P49916 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG3P49916 AL136984.1-201ENST00000607611 1893 ntBASIC6.36□□□□□ -1.39
LIG3P49916 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG3P49916 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
LIG3P49916 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.36□□□□□ -1.39
LIG3P49916 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIG3P49916 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIG3P49916 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG3P49916 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIG3P49916 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG3P49916 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIG3P49916 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
LIG3P49916 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG3P49916 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIG3P49916 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
LIG3P49916 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.35□□□□□ -1.39
LIG3P49916 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.35□□□□□ -1.39
LIG3P49916 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.35□□□□□ -1.39
LIG3P49916 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.35□□□□□ -1.39
LIG3P49916 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIG3P49916 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG3P49916 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
LIG3P49916 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
LIG3P49916 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG3P49916 RN7SKP81-201ENST00000365603 331 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AL139805.1-201ENST00000407837 289 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AL450338.1-201ENST00000407987 512 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG3P49916 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 RPS6P23-201ENST00000413224 722 ntBASIC6.35□□□□□ -1.39
LIG3P49916 CYP4F30P-202ENST00000420048 405 ntBASIC6.35□□□□□ -1.39
LIG3P49916 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.35□□□□□ -1.39
LIG3P49916 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 AC233728.2-201ENST00000425348 757 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AKR1B10P1-201ENST00000425765 942 ntBASIC6.35□□□□□ -1.39
LIG3P49916 MTND4P28-201ENST00000426217 387 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 BX276092.6-201ENST00000430476 250 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AL645936.1-201ENST00000441979 518 ntBASIC6.35□□□□□ -1.39
LIG3P49916 BX276092.8-201ENST00000455722 250 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AL672167.3-201ENST00000465951 960 ntBASIC6.35□□□□□ -1.39
LIG3P49916 RPL37P23-201ENST00000492641 294 ntBASIC6.35□□□□□ -1.39
LIG3P49916 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG3P49916 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.35□□□□□ -1.39
LIG3P49916 AC008429.4-201ENST00000521201 182 ntBASIC6.35□□□□□ -1.39
LIG3P49916 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
LIG3P49916 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.35□□□□□ -1.39
LIG3P49916 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.35□□□□□ -1.39
LIG3P49916 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG3P49916 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.35□□□□□ -1.39
LIG3P49916 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
LIG3P49916 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.35□□□□□ -1.39
LIG3P49916 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.35□□□□□ -1.39
LIG3P49916 BNIP3P8-201ENST00000597863 560 ntBASIC6.35□□□□□ -1.39
LIG3P49916 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms