Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL352979.3-201ENST00000553515 247 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 AL359219.2-201ENST00000555184 348 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 HNRNPCP4-201ENST00000571636 900 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 AC015849.6-201ENST00000605454 474 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 SNORA51-201ENST00000606420 132 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 AC074140.1-201ENST00000621617 208 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 MIR6500-201ENST00000622700 86 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.26□□□□□ -1.73
CXCL12P48061 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CXCL12P48061 TET1P1-201ENST00000426627 2301 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CXCL12P48061 CDY11P-201ENST00000447168 1651 ntBASIC4.26□□□□□ -1.73
CXCL12P48061 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CXCL12P48061 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL12P48061 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL12P48061 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL12P48061 AC100778.3-201ENST00000580060 1750 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL12P48061 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL12P48061 RNU6-167P-201ENST00000384292 106 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 SNORA81-201ENST00000408493 178 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC009237.5-201ENST00000414271 501 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 RANP7-201ENST00000418085 644 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 SETP10-201ENST00000424368 814 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 USP9YP4-201ENST00000424401 1745 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 RPL21P91-201ENST00000429231 479 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL12P48061 AL589765.3-201ENST00000446084 462 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL12P48061 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 PRSS3P4-201ENST00000453323 162 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 RNA5SP246-201ENST00000458909 119 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC135999.1-201ENST00000478962 479 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC110792.1-201ENST00000491826 472 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 RN7SKP157-201ENST00000516174 282 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 TRMT10BP1-201ENST00000519377 943 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL12P48061 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL12P48061 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.25□□□□□ -1.73
CXCL12P48061 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL12P48061 AC120057.2-201ENST00000571520 271 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC017100.2-201ENST00000584628 355 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.25□□□□□ -1.73
CXCL12P48061 COX6CP4-201ENST00000605798 228 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.25□□□□□ -1.73
CXCL12P48061 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL12P48061 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
CXCL12P48061 AC123912.3-201ENST00000600907 1367 ntBASIC4.25□□□□□ -1.73
CXCL12P48061 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL12P48061 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CXCL12P48061 AC027290.2-201ENST00000623210 18662 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.24□□□□□ -1.73
CXCL12P48061 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL12P48061 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CXCL12P48061 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.24□□□□□ -1.73
CXCL12P48061 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL12P48061 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CXCL12P48061 AL607077.1-201ENST00000401718 499 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.24□□□□□ -1.73
CXCL12P48061 AC244033.1-201ENST00000426826 870 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 AF213884.1-201ENST00000488102 463 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 AC020890.1-201ENST00000491837 504 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.24□□□□□ -1.73
CXCL12P48061 LSM3P2-201ENST00000551246 273 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.24□□□□□ -1.73
CXCL12P48061 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.24□□□□□ -1.73
CXCL12P48061 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.24□□□□□ -1.73
CXCL12P48061 BNIP3P19-201ENST00000605397 577 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CXCL12P48061 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CXCL12P48061 AC138627.1-204ENST00000641894 765 ntBASIC4.24□□□□□ -1.73
CXCL12P48061 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL12P48061 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CXCL12P48061 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CXCL12P48061 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL12P48061 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL12P48061 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.24□□□□□ -1.73
CXCL12P48061 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXCL12P48061 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CXCL12P48061 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL12P48061 AC021242.1-201ENST00000507315 2035 ntBASIC4.23□□□□□ -1.73
CXCL12P48061 RNA5SP307-201ENST00000362863 116 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms