Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.04□□□□□ -1.6
HOXC8P31273 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC8P31273 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXC8P31273 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.04□□□□□ -1.6
HOXC8P31273 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC8P31273 CPHL1P-201ENST00000461341 3407 ntBASIC5.04□□□□□ -1.6
HOXC8P31273 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC8P31273 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC8P31273 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HOXC8P31273 AC109446.4-201ENST00000623235 2755 ntBASIC5.04□□□□□ -1.6
HOXC8P31273 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC8P31273 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HOXC8P31273 AL512283.1-201ENST00000606756 1384 ntBASIC5.04□□□□□ -1.6
HOXC8P31273 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC8P31273 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HOXC8P31273 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXC8P31273 AP000568.1-201ENST00000282964 442 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 Y_RNA.126-201ENST00000363382 111 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC8P31273 RAD23BP1-201ENST00000421404 1227 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 AL590609.2-201ENST00000421430 368 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 RPL23AP43-201ENST00000446445 471 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 RHEBP2-201ENST00000450289 600 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 AL935212.3-201ENST00000450729 284 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 METTL15P1-201ENST00000481421 1045 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 MTND3P24-201ENST00000506306 329 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC106806.2-201ENST00000509365 500 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 AP003049.1-201ENST00000529418 457 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC8P31273 AP004607.9-201ENST00000618202 316 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HOXC8P31273 AC006249.1-201ENST00000621223 471 ntBASIC5.03□□□□□ -1.6
HOXC8P31273 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC8P31273 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 OR51H2P-202ENST00000641424 3046 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 SNORA5.1-201ENST00000384275 131 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 RNU6-452P-201ENST00000384406 107 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 RNU6-185P-201ENST00000384421 107 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AC093719.1-202ENST00000392735 373 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 RPS27AP11-201ENST00000402798 447 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC8P31273 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC8P31273 AC004938.1-201ENST00000438468 308 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AC092013.1-201ENST00000438795 332 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 RPL7P33-201ENST00000444159 742 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 GXYLT1P1-201ENST00000446657 490 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AL353718.1-201ENST00000451028 517 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 HMGB1P5-202ENST00000451497 985 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC8P31273 CYCSP34-201ENST00000458172 304 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXC8P31273 AC091167.1-201ENST00000492017 396 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 IGLVIV-65-201ENST00000517313 360 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC8P31273 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC8P31273 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC8P31273 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC8P31273 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC8P31273 AC087477.6-201ENST00000559595 843 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC8P31273 AC123786.2-201ENST00000603459 275 ntBASIC5.02□□□□□ -1.61
HOXC8P31273 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC8P31273 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms