Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.5□□□□□ -1.37
CLIP1P30622 AC110743.1-201ENST00000584870 478 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 BNIP3P41-202ENST00000616656 861 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 MIR7154-201ENST00000620673 73 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CLIP1P30622 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.5□□□□□ -1.37
CLIP1P30622 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC6.5□□□□□ -1.37
CLIP1P30622 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP1P30622 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.5□□□□□ -1.37
CLIP1P30622 AC068993.1-201ENST00000546724 589 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 YPEL5P3-201ENST00000547227 352 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP1P30622 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.5□□□□□ -1.37
CLIP1P30622 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.5□□□□□ -1.37
CLIP1P30622 AC015922.4-201ENST00000612568 690 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 MIR6075-201ENST00000620782 95 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 MIR7702-201ENST00000621931 59 ntBASIC6.5□□□□□ -1.37
CLIP1P30622 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.5□□□□□ -1.37
CLIP1P30622 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CLIP1P30622 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CLIP1P30622 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.49□□□□□ -1.37
CLIP1P30622 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP1P30622 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP1P30622 AC106871.1-201ENST00000568324 3102 ntBASIC6.49□□□□□ -1.37
CLIP1P30622 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
CLIP1P30622 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP1P30622 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.49□□□□□ -1.37
CLIP1P30622 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP1P30622 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP1P30622 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.49□□□□□ -1.37
CLIP1P30622 IL6STP1-201ENST00000346911 1020 ntBASIC6.49□□□□□ -1.37
CLIP1P30622 SNORA60-201ENST00000362396 134 ntBASIC6.49□□□□□ -1.37
CLIP1P30622 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP1P30622 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC6.49□□□□□ -1.37
CLIP1P30622 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP1P30622 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.49□□□□□ -1.37
CLIP1P30622 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.49□□□□□ -1.37
CLIP1P30622 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.49□□□□□ -1.37
CLIP1P30622 AP005264.7-201ENST00000625003 745 ntBASIC6.49□□□□□ -1.37
CLIP1P30622 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CLIP1P30622 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP1P30622 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP1P30622 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CLIP1P30622 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CLIP1P30622 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP1P30622 SNORA70.4-201ENST00000365509 134 ntBASIC6.48□□□□□ -1.37
CLIP1P30622 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.48□□□□□ -1.37
CLIP1P30622 PTMAP2-201ENST00000397627 327 ntBASIC6.48□□□□□ -1.37
CLIP1P30622 VDAC2P1-201ENST00000399358 958 ntBASIC6.48□□□□□ -1.37
CLIP1P30622 PGBD4P8-201ENST00000412993 562 ntBASIC6.48□□□□□ -1.37
CLIP1P30622 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.48□□□□□ -1.37
CLIP1P30622 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP1P30622 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.48□□□□□ -1.37
CLIP1P30622 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP1P30622 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC6.48□□□□□ -1.37
CLIP1P30622 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP1P30622 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP1P30622 AC007066.2-202ENST00000566531 914 ntBASIC6.48□□□□□ -1.37
CLIP1P30622 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.48□□□□□ -1.37
CLIP1P30622 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CLIP1P30622 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.47□□□□□ -1.37
CLIP1P30622 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.47□□□□□ -1.37
CLIP1P30622 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP1P30622 TCEA1P4-201ENST00000415066 844 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 AL035246.1-201ENST00000433554 1255 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.47□□□□□ -1.37
CLIP1P30622 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.47□□□□□ -1.37
CLIP1P30622 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.47□□□□□ -1.37
CLIP1P30622 AC110792.1-201ENST00000491826 472 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP1P30622 RNU6-352P-201ENST00000516908 107 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CLIP1P30622 AC120057.2-201ENST00000571520 271 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 RPL23AP87-202ENST00000573039 466 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.47□□□□□ -1.37
CLIP1P30622 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.47□□□□□ -1.37
CLIP1P30622 AC012442.3-202ENST00000636742 206 ntBASIC6.47□□□□□ -1.37
CLIP1P30622 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.46□□□□□ -1.37
CLIP1P30622 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC6.46□□□□□ -1.37
CLIP1P30622 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CLIP1P30622 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CLIP1P30622 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.46□□□□□ -1.37
CLIP1P30622 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.46□□□□□ -1.38
CLIP1P30622 SNORA71.3-201ENST00000362582 128 ntBASIC6.46□□□□□ -1.38
CLIP1P30622 EIF2S2P5-201ENST00000457635 968 ntBASIC6.46□□□□□ -1.38
CLIP1P30622 AC006517.1-201ENST00000480485 328 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms