Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 AC005242.1-201ENST00000585658 438 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.4□□□□□ -1.71
PTPN6P29350 AC073137.1-201ENST00000605636 634 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AL353600.1-201ENST00000608148 251 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 FAM27B-201ENST00000610601 213 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AL353726.1-201ENST00000614041 1000 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 AL354696.1-201ENST00000614652 497 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.4□□□□□ -1.71
PTPN6P29350 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.4□□□□□ -1.71
PTPN6P29350 MAPK10-263ENST00000641052 4307 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
PTPN6P29350 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PTPN6P29350 AC105074.1-201ENST00000623380 3095 ntBASIC4.4□□□□□ -1.71
PTPN6P29350 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN6P29350 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN6P29350 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PTPN6P29350 RPS27AP11-201ENST00000402798 447 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN6P29350 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AL138785.1-201ENST00000425821 331 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 RPL7P31-201ENST00000450192 724 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC107398.1-201ENST00000486904 505 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 TCP11X3P-202ENST00000514289 1254 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 HMGB1P19-201ENST00000517578 577 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 SLC25A36P1-201ENST00000590111 465 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 AC023762.1-201ENST00000603280 584 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 AL355802.4-201ENST00000607635 548 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 AL355816.1-201ENST00000607951 118 ntBASIC4.39□□□□□ -1.71
PTPN6P29350 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN6P29350 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN6P29350 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PTPN6P29350 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.39□□□□□ -1.71
PTPN6P29350 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PTPN6P29350 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PTPN6P29350 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN6P29350 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN6P29350 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN6P29350 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN6P29350 RNVU1-6-201ENST00000364688 164 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 BX510359.2-201ENST00000417920 305 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AL160175.1-201ENST00000428124 247 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN6P29350 AL691517.1-201ENST00000440833 1235 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN6P29350 XKRY2-201ENST00000442362 1093 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 RPS15AP29-201ENST00000445539 400 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTPN6P29350 EEF1A1P1-201ENST00000447052 739 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 MTND2P25-201ENST00000449028 610 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 RPL7P48-201ENST00000461513 746 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AC090142.1-201ENST00000465776 462 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AC006511.1-201ENST00000470614 315 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPN6P29350 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPN6P29350 RN7SKP276-201ENST00000516242 268 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 IGKV1-32-201ENST00000519290 311 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 IGKV2D-10-201ENST00000520194 281 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN6P29350 AC022790.1-201ENST00000522872 204 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 HIGD1AP5-201ENST00000529959 259 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PTPN6P29350 DYNLL1P4-201ENST00000549314 266 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.38□□□□□ -1.71
PTPN6P29350 SNRPGP1-201ENST00000553864 222 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN6P29350 AC027176.2-201ENST00000559166 746 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN6P29350 MIR4270-201ENST00000581799 70 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.38□□□□□ -1.71
PTPN6P29350 AC026979.4-201ENST00000606555 645 ntBASIC4.38□□□□□ -1.71
PTPN6P29350 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.38□□□□□ -1.71
PTPN6P29350 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms