Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 AP005119.1-201ENST00000580956 292 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 MIR7109-201ENST00000613748 65 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AC012414.7-202ENST00000622705 1090 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 AC099654.12-201ENST00000639868 649 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.73□□□□□ -1.49
COL6A2P12110 QRSL1P1-201ENST00000400977 1540 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.73□□□□□ -1.49
COL6A2P12110 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
COL6A2P12110 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 AC107982.1-201ENST00000507171 1300 ntBASIC5.73□□□□□ -1.49
COL6A2P12110 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL6A2P12110 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.72□□□□□ -1.49
COL6A2P12110 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 AC008627.1-201ENST00000517511 1704 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 RN7SKP187-201ENST00000365536 330 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
COL6A2P12110 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 SNORA51.12-201ENST00000384448 134 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 MIR137-201ENST00000385223 102 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 OR6C69P-201ENST00000394268 893 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 YWHAZP6-201ENST00000399764 738 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 RPL23AP47-201ENST00000408017 460 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 MTND1P21-201ENST00000412991 285 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 LINC00993-201ENST00000420453 540 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.72□□□□□ -1.49
COL6A2P12110 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 AC108479.1-201ENST00000431142 427 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AL513175.1-201ENST00000431492 780 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC069154.1-201ENST00000432914 542 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AL138899.2-201ENST00000439139 499 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 TXNP5-201ENST00000441043 315 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 EIF5AP4-201ENST00000441206 465 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC097463.1-201ENST00000447288 481 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 RPS27AP15-201ENST00000447672 466 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 EEF1B2P3-201ENST00000447718 678 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 OR7E116P-201ENST00000448529 957 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC005077.1-201ENST00000449226 375 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC093392.2-201ENST00000450682 337 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 HMGB1P7-201ENST00000450921 612 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC015724.1-201ENST00000478577 156 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC079841.1-201ENST00000481228 950 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC090013.1-201ENST00000485147 480 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 RPS27P23-201ENST00000487608 251 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 MTAPP1-201ENST00000489154 819 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 AC074255.1-201ENST00000511259 501 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.72□□□□□ -1.49
COL6A2P12110 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.72□□□□□ -1.49
COL6A2P12110 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 AC121758.1-202ENST00000556917 658 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC002519.2-203ENST00000567043 837 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.72□□□□□ -1.49
COL6A2P12110 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC022884.3-201ENST00000579571 248 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.72□□□□□ -1.49
COL6A2P12110 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 AL109618.2-201ENST00000605527 211 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC126118.1-201ENST00000607744 628 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC007684.1-201ENST00000609671 477 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC055764.2-201ENST00000610089 670 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC024941.1-201ENST00000612250 334 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AC095031.1-201ENST00000623685 672 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 AL355480.1-201ENST00000629041 99 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 LINC01739-205ENST00000641890 573 ntBASIC5.72□□□□□ -1.49
COL6A2P12110 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
COL6A2P12110 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
COL6A2P12110 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
COL6A2P12110 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
COL6A2P12110 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL6A2P12110 AC095050.2-201ENST00000510748 1458 ntBASIC5.71□□□□□ -1.49
COL6A2P12110 CDR1-202ENST00000625883 1485 ntBASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms