Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC073335.1-201ENST00000427776 363 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AL606490.7-201ENST00000433136 191 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.95□□□□□ -1.78
UBCP0CG48 AL627224.1-201ENST00000448334 444 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 DDX39BP2-208ENST00000453923 258 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.95□□□□□ -1.78
UBCP0CG48 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.95□□□□□ -1.78
UBCP0CG48 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.95□□□□□ -1.78
UBCP0CG48 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.95□□□□□ -1.78
UBCP0CG48 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
UBCP0CG48 AC008536.1-201ENST00000602872 669 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AL049844.2-201ENST00000604280 628 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AC135803.1-201ENST00000608748 565 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AC011472.4-201ENST00000615848 491 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.95□□□□□ -1.78
UBCP0CG48 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.95□□□□□ -1.78
UBCP0CG48 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
UBCP0CG48 AC105074.1-201ENST00000623380 3095 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 IQCB2P-201ENST00000401788 1633 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 MTCO1P11-201ENST00000429111 1528 ntBASIC3.95□□□□□ -1.78
UBCP0CG48 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.94□□□□□ -1.78
UBCP0CG48 AC097504.1-201ENST00000515103 2415 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
UBCP0CG48 RNA5SP307-201ENST00000362863 116 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.94□□□□□ -1.78
UBCP0CG48 RNU6-244P-201ENST00000391028 104 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 RPS27AP11-201ENST00000402798 447 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.94□□□□□ -1.78
UBCP0CG48 RNU4-34P-201ENST00000410431 124 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 SNORA74C-2-201ENST00000411179 201 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 MTND4P11-201ENST00000417020 1058 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UBCP0CG48 CDY14P-201ENST00000431260 1014 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.94□□□□□ -1.78
UBCP0CG48 CDY12P-201ENST00000440679 1015 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 CDY13P-201ENST00000445813 1015 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 PPIAP20-201ENST00000449839 135 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 CDY23P-201ENST00000451661 1014 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 AC008953.1-201ENST00000497334 318 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AC021087.2-201ENST00000504656 1203 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 PCNAP1-201ENST00000505363 709 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AC007016.1-201ENST00000512110 244 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AC015795.1-201ENST00000513669 327 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 RN7SKP276-201ENST00000516242 268 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
UBCP0CG48 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 AC009117.1-201ENST00000563948 554 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UBCP0CG48 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 AC090181.2-201ENST00000602975 672 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AC010857.1-201ENST00000606398 594 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.94□□□□□ -1.78
UBCP0CG48 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
UBCP0CG48 AP003072.4-201ENST00000624580 310 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 AC116563.2-201ENST00000624751 535 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
UBCP0CG48 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
UBCP0CG48 AC134882.1-201ENST00000603738 1676 ntBASIC3.94□□□□□ -1.78
UBCP0CG48 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBCP0CG48 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBCP0CG48 MFSD8-242ENST00000641690 4199 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBCP0CG48 SDAD1P1-202ENST00000524156 2051 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
UBCP0CG48 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
UBCP0CG48 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UBCP0CG48 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
UBCP0CG48 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.93□□□□□ -1.78
UBCP0CG48 AC067945.1-201ENST00000342609 618 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 RN7SKP149-201ENST00000363008 344 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
UBCP0CG48 VN1R8P-201ENST00000407739 893 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.93□□□□□ -1.78
UBCP0CG48 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UBCP0CG48 RPL23AP27-201ENST00000415161 451 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 RAC1P3-201ENST00000416129 580 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.93□□□□□ -1.78
UBCP0CG48 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.93□□□□□ -1.78
UBCP0CG48 HLA-N-201ENST00000437516 135 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 AC005154.2-201ENST00000438110 379 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 AC023512.1-201ENST00000444513 499 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC3.93□□□□□ -1.78
UBCP0CG48 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.93□□□□□ -1.78
UBCP0CG48 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.93□□□□□ -1.78
UBCP0CG48 AC006511.1-201ENST00000470614 315 ntBASIC3.93□□□□□ -1.78
UBCP0CG48 RPL7AP6-201ENST00000477943 801 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms