Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 RMST_10.1-201ENST00000616309 154 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 AC022079.2-201ENST00000619739 566 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 AL359757.1-201ENST00000623176 255 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 AC078883.4-201ENST00000623218 367 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 AP000648.2-201ENST00000624182 404 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 AC139792.2-201ENST00000624218 587 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 AC079416.3-201ENST00000624479 549 ntBASIC6.07□□□□□ -1.44
SNRPA1P09661 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC6.07□□□□□ -1.44
SNRPA1P09661 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SNRPA1P09661 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.07□□□□□ -1.44
SNRPA1P09661 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNRPA1P09661 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SNRPA1P09661 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SNRPA1P09661 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 OR56B2P-202ENST00000641377 2453 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 CDC27P2-201ENST00000425026 1922 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNRPA1P09661 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AL590762.2-201ENST00000395798 571 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 UQCRBP1-201ENST00000421129 336 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 AL034379.1-201ENST00000423216 253 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 TXNL1P1-201ENST00000429528 554 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 SNRPFP2-201ENST00000440710 251 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC091544.1-201ENST00000484702 348 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 RPL36AP41-201ENST00000493820 306 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.06□□□□□ -1.44
SNRPA1P09661 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC118465.1-201ENST00000513820 1271 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC6.06□□□□□ -1.44
SNRPA1P09661 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AL109741.3-201ENST00000561748 592 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.06□□□□□ -1.44
SNRPA1P09661 VN1R78P-201ENST00000597393 564 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 AC125494.2-201ENST00000602431 657 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AL139344.1-201ENST00000605228 195 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC6.06□□□□□ -1.44
SNRPA1P09661 AC104985.3-201ENST00000623479 597 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 BX649567.1-201ENST00000642071 1134 ntBASIC6.06□□□□□ -1.44
SNRPA1P09661 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SNRPA1P09661 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SNRPA1P09661 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SNRPA1P09661 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SNRPA1P09661 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SNRPA1P09661 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SNRPA1P09661 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 RNA5SP447-201ENST00000363749 119 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
SNRPA1P09661 UBE2V1P11-201ENST00000411559 285 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.05□□□□□ -1.44
SNRPA1P09661 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.05□□□□□ -1.44
SNRPA1P09661 AC004690.1-201ENST00000418216 328 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.05□□□□□ -1.44
SNRPA1P09661 RPL35AP21-201ENST00000437667 333 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 GSTA7P-201ENST00000438425 448 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 RPS27P5-201ENST00000444247 244 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 AC004022.1-201ENST00000447766 1066 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.05□□□□□ -1.44
SNRPA1P09661 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.05□□□□□ -1.44
SNRPA1P09661 AC008280.2-201ENST00000455473 307 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 MTND2P28-201ENST00000457540 1044 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.05□□□□□ -1.44
SNRPA1P09661 AC013356.1-201ENST00000489027 564 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.05□□□□□ -1.44
SNRPA1P09661 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.05□□□□□ -1.44
SNRPA1P09661 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SNRPA1P09661 AC021146.7-201ENST00000509604 775 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 MRPS36P3-201ENST00000519284 130 ntBASIC6.05□□□□□ -1.44
SNRPA1P09661 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms