Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC013244.3-201ENST00000605614 388 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC090948.1-201ENST00000607464 549 ntBASIC5.17□□□□□ -1.58
MMP3P08254 MIR6716-201ENST00000613413 80 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 AL078595.3-201ENST00000623815 1166 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 AL590396.4-201ENST00000636779 956 ntBASIC5.17□□□□□ -1.58
MMP3P08254 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MMP3P08254 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.17□□□□□ -1.58
MMP3P08254 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.17□□□□□ -1.58
MMP3P08254 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
MMP3P08254 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
MMP3P08254 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.17□□□□□ -1.58
MMP3P08254 AC011503.2-201ENST00000594230 1500 ntBASIC5.17□□□□□ -1.58
MMP3P08254 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
MMP3P08254 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
MMP3P08254 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.17□□□□□ -1.58
MMP3P08254 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 AL031119.1-201ENST00000404707 1879 ntBASIC5.16□□□□□ -1.58
MMP3P08254 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 Y_RNA.126-201ENST00000363382 111 ntBASIC5.16□□□□□ -1.58
MMP3P08254 RPL23AP59-201ENST00000399415 461 ntBASIC5.16□□□□□ -1.58
MMP3P08254 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 GTF2IP2-201ENST00000424290 697 ntBASIC5.16□□□□□ -1.58
MMP3P08254 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.16□□□□□ -1.58
MMP3P08254 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AC007537.2-201ENST00000472093 511 ntBASIC5.16□□□□□ -1.58
MMP3P08254 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AC107398.1-201ENST00000486904 505 ntBASIC5.16□□□□□ -1.58
MMP3P08254 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 IGLVIV-65-201ENST00000517313 360 ntBASIC5.16□□□□□ -1.58
MMP3P08254 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.16□□□□□ -1.58
MMP3P08254 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.16□□□□□ -1.58
MMP3P08254 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.16□□□□□ -1.58
MMP3P08254 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.16□□□□□ -1.58
MMP3P08254 MTCO2P2-201ENST00000591258 225 ntBASIC5.16□□□□□ -1.58
MMP3P08254 AC245100.7-201ENST00000609678 442 ntBASIC5.16□□□□□ -1.58
MMP3P08254 RNU6-1192P-201ENST00000612197 107 ntBASIC5.16□□□□□ -1.58
MMP3P08254 RNU6-489P-201ENST00000618289 107 ntBASIC5.16□□□□□ -1.58
MMP3P08254 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.16□□□□□ -1.58
MMP3P08254 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 AC025031.4-201ENST00000621248 3271 ntBASIC5.16□□□□□ -1.58
MMP3P08254 DDX18P5-201ENST00000534547 1306 ntBASIC5.16□□□□□ -1.58
MMP3P08254 AC008432.1-201ENST00000615912 1320 ntBASIC5.16□□□□□ -1.58
MMP3P08254 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.16□□□□□ -1.58
MMP3P08254 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 AC091046.3-201ENST00000631455 1574 ntBASIC5.16□□□□□ -1.58
MMP3P08254 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MMP3P08254 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.15□□□□□ -1.58
MMP3P08254 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
MMP3P08254 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MMP3P08254 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
MMP3P08254 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.15□□□□□ -1.58
MMP3P08254 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
MMP3P08254 ZNF29P-201ENST00000225587 168 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AL034403.1-201ENST00000399414 885 ntBASIC5.15□□□□□ -1.59
MMP3P08254 HMGB3P19-201ENST00000403971 560 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AP000580.1-201ENST00000404439 358 ntBASIC5.15□□□□□ -1.59
MMP3P08254 MIR1193-201ENST00000408109 78 ntBASIC5.15□□□□□ -1.59
MMP3P08254 RNU2-17P-201ENST00000410290 190 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.15□□□□□ -1.59
MMP3P08254 TMBIM7P-201ENST00000418074 855 ntBASIC5.15□□□□□ -1.59
MMP3P08254 E2F6P2-201ENST00000420708 748 ntBASIC5.15□□□□□ -1.59
MMP3P08254 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.15□□□□□ -1.59
MMP3P08254 MTCYBP15-201ENST00000433123 1127 ntBASIC5.15□□□□□ -1.59
MMP3P08254 FTH1P16-201ENST00000435241 552 ntBASIC5.15□□□□□ -1.59
MMP3P08254 FABP5P3-201ENST00000437960 408 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AL157827.1-201ENST00000447622 132 ntBASIC5.15□□□□□ -1.59
MMP3P08254 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.15□□□□□ -1.59
MMP3P08254 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.15□□□□□ -1.59
MMP3P08254 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.15□□□□□ -1.59
MMP3P08254 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
MMP3P08254 AC020898.1-201ENST00000474167 787 ntBASIC5.15□□□□□ -1.59
MMP3P08254 RPL21P47-201ENST00000483696 477 ntBASIC5.15□□□□□ -1.59
MMP3P08254 RN7SKP34-201ENST00000516142 244 ntBASIC5.15□□□□□ -1.59
MMP3P08254 RN7SKP21-201ENST00000516503 220 ntBASIC5.15□□□□□ -1.59
MMP3P08254 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.15□□□□□ -1.59
MMP3P08254 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms