Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC109446.4-201ENST00000623235 2755 ntBASIC3.87□□□□□ -1.79
SPTA1P02549 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.86□□□□□ -1.79
SPTA1P02549 NACA3P-201ENST00000359690 648 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.86□□□□□ -1.79
SPTA1P02549 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.86□□□□□ -1.79
SPTA1P02549 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.86□□□□□ -1.79
SPTA1P02549 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.86□□□□□ -1.79
SPTA1P02549 RPS20P21-201ENST00000466859 343 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.86□□□□□ -1.79
SPTA1P02549 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.86□□□□□ -1.79
SPTA1P02549 AC037471.2-201ENST00000564941 598 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 MIR4433B-201ENST00000581329 102 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.86□□□□□ -1.79
SPTA1P02549 AC110801.1-201ENST00000623590 212 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
SPTA1P02549 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 CASC19-206ENST00000641028 1430 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 AC093829.1-201ENST00000506662 1618 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.86□□□□□ -1.79
SPTA1P02549 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 RN7SKP235-201ENST00000410662 305 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 AC021876.1-201ENST00000425959 359 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.86□□□□□ -1.79
SPTA1P02549 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.86□□□□□ -1.79
SPTA1P02549 RN7SL323P-201ENST00000494712 295 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 AC104164.2-201ENST00000496953 495 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 NPM1P21-201ENST00000513394 762 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 RN7SKP57-201ENST00000517248 293 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.86□□□□□ -1.79
SPTA1P02549 ELOCP35-201ENST00000604289 336 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.86□□□□□ -1.79
SPTA1P02549 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SPTA1P02549 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 AP001157.1-201ENST00000550837 2339 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.86□□□□□ -1.79
SPTA1P02549 AC140134.1-201ENST00000511830 3544 ntBASIC3.86□□□□□ -1.79
SPTA1P02549 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.86□□□□□ -1.79
SPTA1P02549 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SPTA1P02549 AC007738.1-201ENST00000413892 348 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 MTND2P40-201ENST00000436718 841 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.85□□□□□ -1.79
SPTA1P02549 FTH1P24-201ENST00000503502 462 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.85□□□□□ -1.79
SPTA1P02549 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 AC027455.1-201ENST00000574104 594 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 MIR5684-201ENST00000585074 65 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPTA1P02549 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 MIR6852-201ENST00000621699 66 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SPTA1P02549 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPTA1P02549 USP9YP4-201ENST00000424401 1745 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SPTA1P02549 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SPTA1P02549 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 RNU6-213P-201ENST00000384051 104 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 AC062016.2-201ENST00000420950 676 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.85□□□□□ -1.79
SPTA1P02549 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 AC136601.2-201ENST00000604356 474 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 AC113403.1-201ENST00000604910 193 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 AC007546.2-201ENST00000623996 360 ntBASIC3.85□□□□□ -1.79
SPTA1P02549 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC3.85□□□□□ -1.79
SPTA1P02549 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SPTA1P02549 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.85□□□□□ -1.79
SPTA1P02549 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SPTA1P02549 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SPTA1P02549 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SPTA1P02549 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SPTA1P02549 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SPTA1P02549 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SPTA1P02549 HSPE1P12-201ENST00000412576 301 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.84□□□□□ -1.79
SPTA1P02549 USP9YP36-201ENST00000424581 829 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 USP9YP31-201ENST00000431405 881 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC3.84□□□□□ -1.79
SPTA1P02549 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC3.84□□□□□ -1.79
SPTA1P02549 ACTR3P3-201ENST00000480448 893 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 RPS3AP14-201ENST00000483907 780 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 AC010653.1-201ENST00000571108 881 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 MIR4325-201ENST00000583049 90 ntBASIC3.84□□□□□ -1.79
SPTA1P02549 AC006504.3-201ENST00000586818 523 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms