Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
UBE4BO95155 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE4BO95155 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE4BO95155 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE4BO95155 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE4BO95155 RNU6-225P-201ENST00000384613 103 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
UBE4BO95155 RNA5SP332-201ENST00000391063 115 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE4BO95155 HDGFP1-201ENST00000405943 252 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 RPL26P37-201ENST00000411983 438 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 RPS20P14-201ENST00000412545 360 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AL356387.2-201ENST00000422272 243 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 DNAJC19P7-201ENST00000428811 344 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 SKP1P3-201ENST00000429280 487 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 RPEP2-201ENST00000432149 701 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AL606490.7-201ENST00000433136 191 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 Z99127.2-201ENST00000441426 334 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE4BO95155 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC008694.2-201ENST00000517591 306 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBE4BO95155 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 TOMM20P2-201ENST00000540082 421 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.84□□□□□ -1.63
UBE4BO95155 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC245128.3-201ENST00000594721 748 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 MIMT1-201ENST00000597105 1050 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AC016911.1-201ENST00000613297 452 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 AL138721.1-201ENST00000616756 179 ntBASIC4.84□□□□□ -1.63
UBE4BO95155 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
UBE4BO95155 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
UBE4BO95155 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.84□□□□□ -1.63
UBE4BO95155 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
UBE4BO95155 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
UBE4BO95155 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
UBE4BO95155 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.84□□□□□ -1.64
UBE4BO95155 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE4BO95155 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
UBE4BO95155 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
UBE4BO95155 AC008033.1-201ENST00000216407 1162 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 OR5P1P-201ENST00000299512 925 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 TMSB10P2-201ENST00000416049 131 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 MTCYBP12-201ENST00000440559 1134 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.83□□□□□ -1.64
UBE4BO95155 RPL7P33-201ENST00000444159 742 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE4BO95155 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE4BO95155 RPL21P126-201ENST00000470049 478 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 AK3P4-201ENST00000504283 583 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
UBE4BO95155 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.83□□□□□ -1.64
UBE4BO95155 AC016550.3-201ENST00000515706 767 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 RN7SKP92-201ENST00000517266 244 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.83□□□□□ -1.64
UBE4BO95155 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE4BO95155 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE4BO95155 AL020997.2-201ENST00000602607 184 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.83□□□□□ -1.64
UBE4BO95155 RPL23AP61-201ENST00000623642 466 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.83□□□□□ -1.64
UBE4BO95155 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 MAPK10-349ENST00000641767 3661 ntBASIC4.83□□□□□ -1.64
UBE4BO95155 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
UBE4BO95155 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBE4BO95155 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
UBE4BO95155 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBE4BO95155 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBE4BO95155 AC010300.1-201ENST00000600671 5134 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBE4BO95155 SNORA68.2-201ENST00000391263 128 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 AL589655.1-201ENST00000405398 482 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE4BO95155 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.82□□□□□ -1.64
UBE4BO95155 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 AL445528.1-201ENST00000426330 420 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 CNOT7P1-201ENST00000429006 852 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 AC016712.1-201ENST00000431088 378 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBE4BO95155 CLIC4P1-201ENST00000453177 535 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.82□□□□□ -1.64
UBE4BO95155 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.82□□□□□ -1.64
UBE4BO95155 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.82□□□□□ -1.64
UBE4BO95155 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms