Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.26□□□□□ -1.25
CUX2O14529 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC7.26□□□□□ -1.25
CUX2O14529 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC7.26□□□□□ -1.25
CUX2O14529 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC7.26□□□□□ -1.25
CUX2O14529 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC7.26□□□□□ -1.25
CUX2O14529 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.26□□□□□ -1.25
CUX2O14529 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.26□□□□□ -1.25
CUX2O14529 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC7.26□□□□□ -1.25
CUX2O14529 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
CUX2O14529 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
CUX2O14529 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.25□□□□□ -1.25
CUX2O14529 RNU6-301P-201ENST00000384277 107 ntBASIC7.25□□□□□ -1.25
CUX2O14529 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 AL139095.1-201ENST00000404326 391 ntBASIC7.25□□□□□ -1.25
CUX2O14529 AL080315.1-201ENST00000406055 466 ntBASIC7.25□□□□□ -1.25
CUX2O14529 RNU6ATAC10P-201ENST00000408635 111 ntBASIC7.25□□□□□ -1.25
CUX2O14529 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC7.25□□□□□ -1.25
CUX2O14529 GNRHR2P1-201ENST00000555315 631 ntBASIC7.25□□□□□ -1.25
CUX2O14529 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.25□□□□□ -1.25
CUX2O14529 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC7.25□□□□□ -1.25
CUX2O14529 MTCO3P22-201ENST00000603219 784 ntBASIC7.25□□□□□ -1.25
CUX2O14529 AL603750.1-201ENST00000624216 1717 ntBASIC7.25□□□□□ -1.25
CUX2O14529 AC003985.2-201ENST00000562268 1669 ntBASIC7.25□□□□□ -1.25
CUX2O14529 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC7.25□□□□□ -1.25
CUX2O14529 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CUX2O14529 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 VPS35P1-201ENST00000563400 1518 ntBASIC7.25□□□□□ -1.25
CUX2O14529 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CUX2O14529 AL672167.1-204ENST00000641875 3017 ntBASIC7.25□□□□□ -1.25
CUX2O14529 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
CUX2O14529 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.25□□□□□ -1.25
CUX2O14529 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC7.24□□□□□ -1.25
CUX2O14529 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC7.24□□□□□ -1.25
CUX2O14529 OR5B10P-201ENST00000532869 642 ntBASIC7.24□□□□□ -1.25
CUX2O14529 RERGL-202ENST00000536890 367 ntTSL 3 BASIC7.24□□□□□ -1.25
CUX2O14529 AC027455.1-201ENST00000574104 594 ntBASIC7.24□□□□□ -1.25
CUX2O14529 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 AC243654.2-201ENST00000612843 443 ntBASIC7.24□□□□□ -1.25
CUX2O14529 FP236240.3-201ENST00000623061 327 ntBASIC7.24□□□□□ -1.25
CUX2O14529 AC008013.2-202ENST00000637965 364 ntBASIC7.24□□□□□ -1.25
CUX2O14529 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC7.24□□□□□ -1.25
CUX2O14529 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.24□□□□□ -1.25
CUX2O14529 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 TET1P1-201ENST00000426627 2301 ntBASIC7.24□□□□□ -1.25
CUX2O14529 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 THAP12P5-201ENST00000405864 2275 ntBASIC7.24□□□□□ -1.25
CUX2O14529 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.24□□□□□ -1.25
CUX2O14529 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC7.24□□□□□ -1.25
CUX2O14529 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.24□□□□□ -1.25
CUX2O14529 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 GTF3AP5-201ENST00000442645 697 ntBASIC7.24□□□□□ -1.25
CUX2O14529 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.24□□□□□ -1.25
CUX2O14529 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.24□□□□□ -1.25
CUX2O14529 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7.24□□□□□ -1.25
CUX2O14529 RNA5SP360-201ENST00000516555 118 ntBASIC7.24□□□□□ -1.25
CUX2O14529 AC007991.1-201ENST00000522680 631 ntBASIC7.24□□□□□ -1.25
CUX2O14529 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC7.24□□□□□ -1.25
CUX2O14529 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.24□□□□□ -1.25
CUX2O14529 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CUX2O14529 AL049634.3-201ENST00000604968 457 ntBASIC7.24□□□□□ -1.25
CUX2O14529 AL391497.1-201ENST00000608671 547 ntBASIC7.24□□□□□ -1.25
CUX2O14529 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC7.24□□□□□ -1.25
CUX2O14529 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC7.23□□□□□ -1.25
CUX2O14529 SRP72P2-201ENST00000344851 1979 ntBASIC7.23□□□□□ -1.25
CUX2O14529 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUX2O14529 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CUX2O14529 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUX2O14529 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CUX2O14529 RNA5SP151-201ENST00000365632 117 ntBASIC7.23□□□□□ -1.25
CUX2O14529 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CUX2O14529 AC007066.1-201ENST00000392902 381 ntBASIC7.23□□□□□ -1.25
CUX2O14529 OR9M1P-201ENST00000459641 921 ntBASIC7.23□□□□□ -1.25
CUX2O14529 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC7.23□□□□□ -1.25
CUX2O14529 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.23□□□□□ -1.25
CUX2O14529 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms