Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
FOXN3O00409 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 AC119744.1-201ENST00000454746 1715 ntBASIC5.45□□□□□ -1.54
FOXN3O00409 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
FOXN3O00409 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 SNORA17.1-201ENST00000362945 126 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 RN7SKP113-201ENST00000363891 295 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 BMS1P13-201ENST00000417301 885 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AC027644.1-201ENST00000419595 298 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 RPL7P4-203ENST00000430239 730 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 CETN4P-201ENST00000432407 469 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FOXN3O00409 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC004980.3-201ENST00000447046 365 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AC091180.1-201ENST00000462104 372 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AP000942.1-201ENST00000463969 747 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 RPL23AP44-201ENST00000482216 473 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 RN7SL591P-201ENST00000496150 292 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC072052.1-201ENST00000496556 306 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC092747.2-201ENST00000545069 983 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC009097.3-201ENST00000563557 1018 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC069366.1-201ENST00000583159 838 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 NTAN1P1-201ENST00000603150 646 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 Z99289.3-201ENST00000605586 594 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AC126915.2-201ENST00000610957 190 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 MIR6862-1-201ENST00000613016 70 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 MIR6862-2-201ENST00000614755 70 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXN3O00409 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXN3O00409 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
FOXN3O00409 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
FOXN3O00409 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.44□□□□□ -1.54
FOXN3O00409 BX005019.1-201ENST00000561881 1810 ntBASIC5.44□□□□□ -1.54
FOXN3O00409 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.44□□□□□ -1.54
FOXN3O00409 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FOXN3O00409 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
FOXN3O00409 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 NACA3P-201ENST00000359690 648 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 RNA5SP435-201ENST00000364044 108 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AL079342.2-201ENST00000403367 482 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 GSTA8P-201ENST00000404253 637 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 RN7SKP126-201ENST00000411143 300 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AL356320.2-201ENST00000417263 507 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 Z75741.2-201ENST00000417272 1167 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 KRR1P1-201ENST00000419430 803 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 MTND2P16-201ENST00000419987 799 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC104333.2-201ENST00000422630 192 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC010099.3-201ENST00000423896 409 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.43□□□□□ -1.54
FOXN3O00409 OR5AW1P-201ENST00000426334 1006 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 NANOGP4-201ENST00000427230 913 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AP001324.1-201ENST00000428553 399 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.43□□□□□ -1.54
FOXN3O00409 RPL12P28-201ENST00000430852 489 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.43□□□□□ -1.54
FOXN3O00409 AL450023.3-201ENST00000440592 271 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
FOXN3O00409 PRDX3P4-201ENST00000470828 747 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.43□□□□□ -1.54
FOXN3O00409 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.43□□□□□ -1.54
FOXN3O00409 AC023538.1-201ENST00000534576 736 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 OR4U1P-201ENST00000554958 912 ntBASIC5.43□□□□□ -1.54
FOXN3O00409 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.43□□□□□ -1.54
FOXN3O00409 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms