Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 RAD23BP1-201ENST00000421404 1227 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL627308.1-201ENST00000435693 821 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL356535.1-201ENST00000440335 398 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 TPTE2P3-201ENST00000441562 1189 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 TXNP2-201ENST00000443918 295 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 H2AFZP5-201ENST00000446960 382 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 NDUFA5P8-201ENST00000449019 346 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 FAR2P1-206ENST00000449736 709 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC072052.1-201ENST00000496556 306 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC008638.1-201ENST00000506035 866 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 PGAM1P13-201ENST00000507497 754 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC091868.1-201ENST00000508746 304 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 OR11J2P-201ENST00000555298 907 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC016180.1-201ENST00000567945 403 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC141257.3-201ENST00000572906 215 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC022884.3-201ENST00000579571 248 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 MIR4512-201ENST00000583257 77 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 VN1R84P-201ENST00000593697 235 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 BPIFA4P-203ENST00000603168 689 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 HMGB1P51-201ENST00000605166 638 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC009163.6-201ENST00000612367 342 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 RN7SL722P-201ENST00000617780 284 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 RN7SL565P-201ENST00000618246 284 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC138907.10-201ENST00000623708 983 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AP003497.2-201ENST00000624220 967 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC096656.1-201ENST00000623826 1364 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 AC099654.2-201ENST00000433031 1980 ntBASIC3.49□□□□□ -1.85
RBFOX3A6NFN3 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC006971.1-201ENST00000407916 4486 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 USP9YP4-201ENST00000424401 1745 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 RNA5SP183-201ENST00000362452 119 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 MIR105-2-201ENST00000385083 81 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 SNORA3C-201ENST00000408792 125 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 BMS1P13-201ENST00000417301 885 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 RBMY1KP-201ENST00000423480 476 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC009965.2-201ENST00000425328 970 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 NDUFA5P1-201ENST00000433858 341 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 SLC25A18P1-201ENST00000449385 454 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 RNU7-27P-201ENST00000459281 62 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 COPS8P2-201ENST00000473228 627 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC069499.1-201ENST00000489433 509 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 CDH12P2-201ENST00000504393 298 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC006499.3-201ENST00000506077 748 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC018797.3-201ENST00000513388 1241 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC067904.2-201ENST00000517322 1283 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 NARSP2-201ENST00000518524 679 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC022832.1-201ENST00000530718 645 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC084033.1-201ENST00000550830 633 ntBASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.48□□□□□ -1.85
RBFOX3A6NFN3 AC051619.2-201ENST00000559063 397 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms