Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AL627224.1-201ENST00000448334 444 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RPS3AP53-201ENST00000454716 778 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC091685.2-201ENST00000454924 864 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 EIF2S2P5-201ENST00000457635 968 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RPS3AP41-201ENST00000462701 778 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RPL23AP65-201ENST00000475608 468 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC098799.3-201ENST00000506095 438 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RNU6-1004P-201ENST00000516584 111 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 SOX5P1-201ENST00000524155 1127 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AP001922.4-201ENST00000526967 290 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC023762.1-201ENST00000603280 584 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC093765.1-201ENST00000603758 881 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC010201.1-201ENST00000605051 540 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC005084.1-201ENST00000605160 304 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AL391597.1-201ENST00000618707 694 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 MIR6853-201ENST00000619642 74 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 AC079298.2-201ENST00000623885 459 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 OR2L1P-202ENST00000641567 1023 ntBASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RHBDD3Q9Y3P4 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 A2MP1-204ENST00000566278 4130 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RNU1-94P-201ENST00000362627 173 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RPS27AP11-201ENST00000402798 447 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RNA5SP239-201ENST00000410218 129 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RN7SKP267-201ENST00000410381 285 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 BX510359.2-201ENST00000417920 305 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 PDSS1P1-201ENST00000422953 1114 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 NDUFA5P10-201ENST00000432147 357 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC008072.1-201ENST00000434254 824 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC016831.4-201ENST00000438302 307 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 HMGB1P26-201ENST00000452520 628 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RPL7AP28-201ENST00000464513 571 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RPL36AP41-201ENST00000493820 306 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC008897.1-201ENST00000494006 347 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 NDUFA5P12-201ENST00000503796 343 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 STMN1P2-201ENST00000508435 439 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RNU6-1308P-201ENST00000516817 103 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 BRD9P1-201ENST00000529855 560 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC100770.1-201ENST00000532310 322 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC063949.1-201ENST00000552900 865 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC009303.3-201ENST00000591103 736 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AC090181.2-201ENST00000602975 672 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AL445528.2-201ENST00000620582 470 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 AL391684.1-202ENST00000641293 1636 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 SDAD1P1-202ENST00000524156 2051 ntBASIC3.98□□□□□ -1.77
RHBDD3Q9Y3P4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RHBDD3Q9Y3P4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms