Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC084783.1-201ENST00000565846 910 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AP005119.2-201ENST00000579735 1105 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 RPL12P25-202ENST00000598100 674 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC011492.1-201ENST00000600023 315 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC008782.1-201ENST00000603386 430 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC069431.2-201ENST00000604149 1099 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AP001033.2-201ENST00000609701 1003 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AL136295.6-201ENST00000610486 658 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 HSPD1P14-201ENST00000432666 1618 ntBASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SIX4Q9UIU6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 RNU6-354P-201ENST00000383862 107 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 RNU6-610P-201ENST00000384264 107 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 TCEA1P2-201ENST00000420496 906 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AP001324.1-201ENST00000428553 399 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 MTCYBP15-201ENST00000433123 1127 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 RPL23AP93-201ENST00000440847 484 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 ARL2BPP10-201ENST00000446487 531 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 CYCSP20-201ENST00000473154 315 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 RPL5P22-201ENST00000480199 884 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 SUMO1P1-201ENST00000497904 306 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AK3P4-201ENST00000504283 583 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 OR7E13P-201ENST00000526052 910 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC008507.2-201ENST00000588402 1176 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC006272.2-201ENST00000594725 163 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC115286.1-201ENST00000604298 434 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC078880.5-201ENST00000617845 421 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC126544.2-201ENST00000625174 749 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC107068.1-201ENST00000563286 4218 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 AC108751.5-201ENST00000492880 1336 ntBASIC4.91□□□□□ -1.62
SIX4Q9UIU6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SIX4Q9UIU6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.9□□□□□ -1.62
SIX4Q9UIU6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
SIX4Q9UIU6 Z95331.1-201ENST00000623075 23112 ntBASIC4.9□□□□□ -1.62
SIX4Q9UIU6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SIX4Q9UIU6 AL603750.1-201ENST00000624216 1717 ntBASIC4.9□□□□□ -1.62
SIX4Q9UIU6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RPS4XP9-201ENST00000405151 780 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RNA5SP296-201ENST00000410523 111 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RPS3AP25-201ENST00000411660 793 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RPS27AP7-201ENST00000422792 455 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 MTND2P2-201ENST00000434633 945 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 RPL7P33-201ENST00000444159 742 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 snoU109.3-201ENST00000459477 145 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC008379.1-201ENST00000463655 464 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 LARP7P4-201ENST00000481075 878 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC069306.1-201ENST00000507006 843 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 DUX4L52-201ENST00000549363 777 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC068831.4-201ENST00000556118 109 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC023825.1-201ENST00000566704 1030 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC069061.3-201ENST00000582254 823 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 CBX3P2-202ENST00000583365 535 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 MIR4715-201ENST00000584117 79 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC093765.1-201ENST00000603758 881 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 COX6CP4-201ENST00000605798 228 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AC021851.1-201ENST00000608537 1082 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AL133243.1-201ENST00000614487 366 ntBASIC4.9□□□□□ -1.63
SIX4Q9UIU6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SIX4Q9UIU6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms