Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VPS29Q9UBQ0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 MIR448-201ENST00000362131 111 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RHOT1P2-201ENST00000366423 333 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RPS4XP9-201ENST00000405151 780 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RPS27AP7-201ENST00000422792 455 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 SERPINA7P1-201ENST00000443077 631 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 NDUFA12P1-201ENST00000455914 406 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RPS29P22-201ENST00000472363 168 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AC007686.1-201ENST00000488511 463 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RPL35P6-201ENST00000490024 372 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 IGHV3-63-201ENST00000518422 341 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AC234771.5-201ENST00000600161 514 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AC015813.4-201ENST00000610469 179 ntBASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
VPS29Q9UBQ0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC087190.4-201ENST00000574616 8334 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC097504.1-201ENST00000515103 2415 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 MIR93-201ENST00000385024 80 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 ELOCP19-201ENST00000411919 318 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AL160275.2-201ENST00000412010 394 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 VN1R31P-201ENST00000417498 730 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 GAPDHP49-201ENST00000421421 961 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 ELOCP18-201ENST00000434209 337 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AL138787.1-202ENST00000437804 898 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 RPL23AP46-201ENST00000438548 490 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 snoU13.1-201ENST00000459157 104 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 CCDC75P1-201ENST00000469247 791 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 RN7SL691P-201ENST00000494487 301 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC025445.1-201ENST00000502728 300 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 PGBD4P4-201ENST00000509673 613 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 RNA5SP519-201ENST00000516480 119 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC116651.1-201ENST00000609724 556 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AP003497.2-201ENST00000624220 967 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 AL133243.3-201ENST00000617415 3004 ntBASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.02□□□□□ -1.77
VPS29Q9UBQ0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 AC090971.4-201ENST00000560291 1800 ntBASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
VPS29Q9UBQ0 MIR708-201ENST00000390708 88 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms