Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 FARSBP1-201ENST00000435808 1778 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 IGKV7-3-201ENST00000357453 298 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 RNU6-877P-201ENST00000383868 107 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 MIR1282-201ENST00000408865 101 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 RNA5SP156-201ENST00000410250 110 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 RNU4-55P-201ENST00000410731 137 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 MTND4LP17-201ENST00000414607 293 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC004690.1-201ENST00000418216 328 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 USP9YP27-201ENST00000418455 438 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 BX890604.2-201ENST00000427883 474 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 MRPS21P3-201ENST00000436696 262 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AL451074.3-201ENST00000437709 472 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 PGBD4P3-201ENST00000440731 581 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 RPS7P5-201ENST00000441482 581 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 SLC31A1P1-201ENST00000451221 567 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 KCTD9P5-201ENST00000504141 1170 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC106872.4-201ENST00000510050 523 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 KCTD9P2-201ENST00000512203 1013 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC026412.2-201ENST00000512270 1075 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC010493.1-201ENST00000513479 292 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 RNU6-583P-201ENST00000516012 92 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 RNA5SP400-201ENST00000517155 111 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC027309.2-201ENST00000520566 192 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AP005639.1-201ENST00000526939 192 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 SUGT1P3-202ENST00000604259 383 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 PART1_1.1-201ENST00000611761 217 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC009159.1-201ENST00000618386 642 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC243756.2-201ENST00000618406 463 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 AC022325.1-201ENST00000502748 2199 ntBASIC6.68□□□□□ -1.34
CNTN3Q9P232 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.68□□□□□ -1.34
CNTN3Q9P232 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CNTN3Q9P232 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC021242.1-201ENST00000507315 2035 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC010401.2-201ENST00000575137 4934 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 RNU1-134P-201ENST00000362935 165 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 RNU6-1090P-201ENST00000364065 94 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC004386.1-201ENST00000393214 761 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 RNA5SP251-201ENST00000410614 137 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AL139128.1-201ENST00000413921 941 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC115283.1-201ENST00000427353 400 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 NPM1P22-201ENST00000427761 952 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 MTND5P14-201ENST00000441481 1267 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 RPS10P18-201ENST00000442662 495 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 RPS27AP3-201ENST00000453803 454 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 RNU7-27P-201ENST00000459281 62 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC023194.2-201ENST00000465398 406 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC092757.1-201ENST00000467293 467 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC114786.4-201ENST00000508771 728 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 SCARNA15.1-201ENST00000516384 125 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AF235103.2-201ENST00000525753 346 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AL512310.1-201ENST00000548639 172 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.67□□□□□ -1.34
CNTN3Q9P232 CYCSP2-201ENST00000558168 301 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 AC093519.1-201ENST00000566109 298 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 MIR3682-201ENST00000581338 84 ntBASIC6.67□□□□□ -1.34
CNTN3Q9P232 NPIPB1P-202ENST00000588786 828 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms