Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC068831.4-201ENST00000556118 109 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AL133338.2-201ENST00000604292 736 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC139769.3-201ENST00000618383 175 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 DDX18P5-201ENST00000534547 1306 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 AC017002.4-201ENST00000604721 1525 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 ZNF137P-201ENST00000456718 1920 ntBASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.66□□□□□ -1.66
TM9SF3Q9HD45 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 AC096656.1-201ENST00000623826 1364 ntBASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 AL445487.1-201ENST00000415694 1580 ntBASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 MFSD8-220ENST00000641243 1422 ntBASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 CCT8P1-201ENST00000413611 1657 ntBASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TM9SF3Q9HD45 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC008549.2-201ENST00000333482 706 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 RNA5SP479-201ENST00000364858 117 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AL592291.1-201ENST00000403830 352 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC004975.1-201ENST00000428733 208 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 ARL4AP3-201ENST00000441452 574 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AL606490.8-201ENST00000441624 319 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 RPL7P31-201ENST00000450192 724 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC011276.1-201ENST00000469688 323 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 MTCO3P42-201ENST00000509488 518 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC021146.3-201ENST00000511911 260 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 MTCO3P39-201ENST00000514812 518 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC023575.1-201ENST00000580510 358 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 HMGB1P51-201ENST00000605166 638 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC092653.1-201ENST00000608509 531 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC005021.1-201ENST00000608730 355 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC016957.2-201ENST00000616998 848 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AC079298.2-201ENST00000623885 459 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 RAD17P1-201ENST00000418130 2042 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 ZFRP1-201ENST00000457579 2970 ntBASIC4.65□□□□□ -1.67
TM9SF3Q9HD45 AL359922.3-201ENST00000624779 1670 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RNU1-94P-201ENST00000362627 173 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RNU6-618P-201ENST00000363518 112 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RPL31P52-201ENST00000407532 367 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RNA5SP146-201ENST00000410743 123 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RWDD4P2-201ENST00000426392 563 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 NUTF2P7-201ENST00000453086 375 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC010618.1-201ENST00000469924 477 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC109327.1-201ENST00000471666 403 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RWDD4P1-201ENST00000488019 565 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 RPL36AP41-201ENST00000493820 306 ntBASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
TM9SF3Q9HD45 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms