Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 GTF2IP22-201ENST00000554443 182 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 DCAF13P3-201ENST00000561147 1334 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 MIR4701-201ENST00000583094 63 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC015712.7-201ENST00000615211 635 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC096861.1-201ENST00000616652 240 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC126175.1-201ENST00000617041 758 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 AC239868.2-201ENST00000564237 4527 ntBASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXP3Q9BZS1 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 LINC02019-201ENST00000608605 2060 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 CASC19-260ENST00000641828 2001 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC114774.1-201ENST00000507410 1770 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AP005432.1-201ENST00000580891 3485 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 PABPC1P9-201ENST00000426076 1612 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 Z99496.1-201ENST00000469424 1477 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 MTND4P23-201ENST00000447723 1363 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RNA5SP110-201ENST00000362638 115 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RNU6-374P-201ENST00000364146 108 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 MIR130B-202ENST00000385018 82 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 Y_RNA.582-201ENST00000391023 95 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RN7SKP56-201ENST00000410513 331 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 USP9YP6-201ENST00000413550 854 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RPS7P8-201ENST00000418311 581 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RPL21P32-201ENST00000419877 477 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 GLRXP1-201ENST00000423261 334 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RPL31P54-201ENST00000429803 370 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC097463.1-201ENST00000447288 481 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 USP9YP34-201ENST00000453983 808 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 PSMC1P13-201ENST00000458195 985 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC023194.2-201ENST00000465398 406 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AL121769.1-201ENST00000469473 401 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC079841.1-201ENST00000481228 950 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RPL7L1P4-201ENST00000513004 707 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RNU6-416P-201ENST00000516265 103 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RN7SKP31-201ENST00000516354 278 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 Y_RNA.702-201ENST00000516843 96 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AP003117.2-201ENST00000606010 545 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC024560.3-201ENST00000608482 349 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 AC091304.9-201ENST00000612091 226 ntBASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXP3Q9BZS1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC087516.1-201ENST00000561236 2428 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 CR383658.2-201ENST00000547576 1525 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 OR10R3P-201ENST00000361688 942 ntBASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXP3Q9BZS1 RNU6-1263P-201ENST00000384601 106 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms