Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL360181.1-201ENST00000452591 184 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL356981.1-201ENST00000454879 684 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092916.2-201ENST00000462510 417 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IGKV1-37-201ENST00000465170 398 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL621P-201ENST00000472565 299 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NDUFS5P2-201ENST00000484004 306 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC093270.2-201ENST00000486157 792 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC131210.1-201ENST00000491347 441 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL558P-201ENST00000497468 299 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL104P-201ENST00000498686 293 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM251P1-201ENST00000503717 318 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL390726.2-201ENST00000504791 343 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC024451.1-201ENST00000508013 779 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IGKV1D-37-201ENST00000509129 353 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CARMN-203ENST00000509909 592 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IGHVII-78-1-201ENST00000521105 269 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 KCTD21-AS1-202ENST00000523626 555 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MS4A4A-206ENST00000532114 698 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 COA4-202ENST00000537289 582 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC025260.1-201ENST00000548858 430 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC01579-203ENST00000555023 400 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TVP23BP1-201ENST00000557500 617 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC104316.2-201ENST00000559049 326 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC138749.2-201ENST00000566048 167 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC087564.1-201ENST00000569751 456 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL23AP84-201ENST00000571193 464 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL590084.3-201ENST00000573276 337 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC032019.1-201ENST00000579100 173 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC005323.1-201ENST00000579914 569 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 C17orf62-220ENST00000580560 564 ntTSL 4 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC009955.3-201ENST00000596829 448 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CYP2G1P-202ENST00000597833 870 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC027644.2-201ENST00000603786 240 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC008814.1-201ENST00000603797 406 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 HINT1P2-201ENST00000604731 235 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TMCC1-AS1-202ENST00000604747 413 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC025518.2-201ENST00000605229 492 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC123912.5-201ENST00000605470 343 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL158835.1-202ENST00000607914 365 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC135048.3-201ENST00000614997 328 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC027139.2-201ENST00000615639 448 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GPC6-202ENST00000617456 792 ntTSL 3 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CDK10-221ENST00000617879 819 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MED15P6-202ENST00000621415 787 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC092278.1-201ENST00000621951 745 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM231C-201ENST00000624031 510 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AL353649.1-201ENST00000625060 619 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC074101.1-201ENST00000637861 241 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 BX005132.2-201ENST00000641254 464 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CKMT2-AS1-202ENST00000501927 2463 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GRIA1-203ENST00000448073 2825 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NRG1-203ENST00000405005 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ZSWIM5P1-201ENST00000420606 1970 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC4A4-205ENST00000512686 2316 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 PHACTR1-205ENST00000379350 4784 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms