Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 MTCO1P18-201ENST00000455518 1419 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 MTCO1P4-201ENST00000520516 1409 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX3Q99909 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX3Q99909 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 AC006210.2-201ENST00000367074 1545 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 HSPA8P19-201ENST00000505359 1517 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SSX3Q99909 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 RNA5SP305-201ENST00000362665 119 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 RN7SKP153-201ENST00000365026 316 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SSX3Q99909 HNRNPDP2-201ENST00000406475 478 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC007394.1-201ENST00000421941 531 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 AL161722.2-201ENST00000434731 981 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 ARL5AP2-201ENST00000444698 533 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC073850.1-201ENST00000449243 255 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 RN7SL329P-201ENST00000467740 299 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 SETP6-201ENST00000479329 568 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC090686.1-201ENST00000481577 749 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 RN7SL808P-201ENST00000496066 299 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 RNU6-334P-201ENST00000517072 102 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC092490.3-201ENST00000545370 572 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC106734.1-201ENST00000568646 663 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC012254.4-201ENST00000588843 273 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX3Q99909 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.22□□□□□ -1.73
SSX3Q99909 BNIP3P19-201ENST00000605397 577 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC018695.5-201ENST00000605872 315 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC120053.1-201ENST00000607706 736 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 OR6R2P-201ENST00000609216 300 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC245100.7-201ENST00000609678 442 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC099669.2-201ENST00000616549 437 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AC068870.2-201ENST00000620635 389 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 MIR6730-201ENST00000622213 67 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 AP002799.1-201ENST00000623552 423 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
SSX3Q99909 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX3Q99909 AC007390.2-201ENST00000606229 3803 ntBASIC4.22□□□□□ -1.73
SSX3Q99909 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SSX3Q99909 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
SSX3Q99909 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SSX3Q99909 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SSX3Q99909 AL137100.1-201ENST00000556703 1620 ntBASIC4.21□□□□□ -1.73
SSX3Q99909 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.21□□□□□ -1.73
SSX3Q99909 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SSX3Q99909 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.21□□□□□ -1.73
SSX3Q99909 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
SSX3Q99909 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
SSX3Q99909 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SSX3Q99909 SNORA58B-201ENST00000364259 136 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 U3.15-201ENST00000365398 212 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX3Q99909 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SSX3Q99909 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.21□□□□□ -1.74
SSX3Q99909 AC008173.1-201ENST00000418901 264 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX3Q99909 MTCO2P1-201ENST00000424648 477 ntBASIC4.21□□□□□ -1.74
SSX3Q99909 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.21□□□□□ -1.74
SSX3Q99909 ETF1P3-201ENST00000430422 1160 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms