Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 ACP5-208ENST00000590420 301 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 RPS4XP21-201ENST00000603814 750 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC124319.3-201ENST00000616832 526 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 OR52H1-202ENST00000641796 1061 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
PHOX2BQ99453 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
PHOX2BQ99453 AC105749.1-201ENST00000631338 2008 ntBASIC7.39□□□□□ -1.23
PHOX2BQ99453 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC245505.2-201ENST00000553572 3055 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 API5-210ENST00000534600 1760 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 RN7SKP191-201ENST00000364713 306 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 RN7SKP208-201ENST00000365474 361 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL024474.1-201ENST00000404655 591 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL355375.1-201ENST00000405686 392 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 RNA5SP345-201ENST00000410646 108 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 RNU6-954P-201ENST00000411355 107 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 FABP7P2-201ENST00000429946 379 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC012075.1-201ENST00000436549 580 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 CEACAMP9-201ENST00000442990 513 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 RPS26P56-201ENST00000444468 240 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 PRPS1P1-201ENST00000445305 876 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL583843.1-201ENST00000456070 346 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 MYL6P4-201ENST00000477911 453 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC009269.1-202ENST00000484381 469 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 RN7SL283P-201ENST00000489055 303 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 Y_RNA.654-201ENST00000497848 106 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC018797.1-201ENST00000510791 255 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 IGKV3D-31-201ENST00000519131 281 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 MTND6P19-201ENST00000519399 524 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AP005902.1-201ENST00000521358 186 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 MTND4P7-201ENST00000523876 130 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC090615.1-201ENST00000577519 154 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 MIR3942-201ENST00000585264 109 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL158151.4-201ENST00000600965 507 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC109309.2-201ENST00000612597 332 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL390240.1-201ENST00000612950 384 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC211433.3-201ENST00000623770 375 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 CYP3A51P-201ENST00000633513 256 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AL049641.1-201ENST00000441055 1948 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 AC016583.1-201ENST00000624221 2431 ntBASIC7.38□□□□□ -1.23
PHOX2BQ99453 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC7.38□□□□□ -1.23
PHOX2BQ99453 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
PHOX2BQ99453 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms