Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
IFT140Q96RY7 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.81□□□□□ -1.32
IFT140Q96RY7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
IFT140Q96RY7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
IFT140Q96RY7 U1.1-201ENST00000384101 164 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.8□□□□□ -1.32
IFT140Q96RY7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 AC098799.1-201ENST00000504752 800 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.8□□□□□ -1.32
IFT140Q96RY7 NDUFA5P2-201ENST00000519723 344 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 OR8I1P-201ENST00000529291 931 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.8□□□□□ -1.32
IFT140Q96RY7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.8□□□□□ -1.32
IFT140Q96RY7 ELOCP35-201ENST00000604289 336 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 AC055839.1-201ENST00000634467 498 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.8□□□□□ -1.32
IFT140Q96RY7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 AP004289.2-201ENST00000444413 1457 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 PRO1804-201ENST00000623780 2050 ntBASIC6.8□□□□□ -1.32
IFT140Q96RY7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
IFT140Q96RY7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
IFT140Q96RY7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AL133162.1-201ENST00000463228 453 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 RPL6P9-201ENST00000466502 859 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 RPS29P2-201ENST00000479278 136 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 SETP6-201ENST00000479329 568 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC106707.2-201ENST00000484182 374 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC104619.4-201ENST00000510773 249 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 NPM1P5-201ENST00000557228 838 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC024023.1-201ENST00000624530 922 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC140134.1-201ENST00000511830 3544 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC090589.1-201ENST00000473109 362 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 KRT19P6-201ENST00000510983 209 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.79□□□□□ -1.32
IFT140Q96RY7 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 AF001550.2-201ENST00000636643 217 ntBASIC6.79□□□□□ -1.32
IFT140Q96RY7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
IFT140Q96RY7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 ZNF962P-201ENST00000443465 3140 ntBASIC6.78□□□□□ -1.32
IFT140Q96RY7 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
IFT140Q96RY7 RNA5SP267-201ENST00000364893 126 ntBASIC6.78□□□□□ -1.32
IFT140Q96RY7 TRIM60P17-201ENST00000415181 719 ntBASIC6.78□□□□□ -1.32
IFT140Q96RY7 OR4K6P-201ENST00000416478 897 ntBASIC6.78□□□□□ -1.32
IFT140Q96RY7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 HSPD1P21-201ENST00000436541 245 ntBASIC6.78□□□□□ -1.32
IFT140Q96RY7 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
IFT140Q96RY7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 AC008966.2-201ENST00000606157 453 ntBASIC6.78□□□□□ -1.32
IFT140Q96RY7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
IFT140Q96RY7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
IFT140Q96RY7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 PCAT14-202ENST00000627127 3935 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
IFT140Q96RY7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
IFT140Q96RY7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 RPS7P15-201ENST00000415804 584 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 RPL23AP25-201ENST00000430973 463 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 PPP1R11P1-201ENST00000486095 376 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 CDH12P2-201ENST00000504393 298 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 HSPD1P15-201ENST00000505573 1122 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 AC091516.1-201ENST00000549191 703 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 GTF2IP8-201ENST00000560687 584 ntBASIC6.77□□□□□ -1.33
IFT140Q96RY7 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.77□□□□□ -1.33
IFT140Q96RY7 COX6CP4-201ENST00000605798 228 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms