Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL21P67-201ENST00000402896 478 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AL035079.1-201ENST00000405210 287 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AL390316.1-201ENST00000406279 553 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 MOB1AP1-201ENST00000430903 535 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 RPL7P34-201ENST00000433316 712 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS3Q969F9 GAPDHP58-201ENST00000438477 1006 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS3Q969F9 RPS21P4-201ENST00000487122 248 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC072052.1-201ENST00000496556 306 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC008953.1-201ENST00000497334 318 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 IGBP1P5-201ENST00000507524 1000 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC118282.2-201ENST00000508739 374 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.7□□□□□ -1.5
HPS3Q969F9 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 RNA5SP34-201ENST00000516887 130 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 IGKV2-36-201ENST00000519999 223 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 COX6B1P6-201ENST00000522347 255 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS3Q969F9 MIR1269B-201ENST00000580405 75 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.7□□□□□ -1.5
HPS3Q969F9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 AC068790.7-201ENST00000602347 528 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 RPSAP73-201ENST00000614820 330 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AP003485.2-201ENST00000623636 610 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 AC138965.3-201ENST00000623875 498 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.7□□□□□ -1.5
HPS3Q969F9 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 ATE1-AS1-202ENST00000636460 506 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 MFSD8-245ENST00000641743 948 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 CASC19-206ENST00000641028 1430 ntBASIC5.7□□□□□ -1.5
HPS3Q969F9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS3Q969F9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HPS3Q969F9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HPS3Q969F9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.7□□□□□ -1.5
HPS3Q969F9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HPS3Q969F9 PABPC1P6-201ENST00000445594 1829 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HPS3Q969F9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HPS3Q969F9 SNORA40.2-201ENST00000390847 128 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 RNU4-34P-201ENST00000410431 124 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS3Q969F9 SLC35E1P1-201ENST00000419313 864 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC073069.1-201ENST00000428657 441 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 UBE2V1P5-201ENST00000440070 405 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS3Q969F9 FAR2P1-206ENST00000449736 709 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC233982.1-201ENST00000451247 436 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC092647.2-201ENST00000452998 253 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC002553.2-201ENST00000453217 340 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 MRPL42P4-201ENST00000453267 443 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 MRPL35P4-201ENST00000453682 566 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 USP9YP25-201ENST00000457708 443 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 RPL23AP71-201ENST00000470966 469 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 OR2AO1P-201ENST00000476497 403 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 BX284632.1-201ENST00000478218 541 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS3Q969F9 GTF2F2P1-201ENST00000511083 675 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS3Q969F9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS3Q969F9 SETP1-201ENST00000556014 845 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC018552.1-201ENST00000562099 811 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AC022662.1-201ENST00000580252 331 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS3Q969F9 AL392112.1-201ENST00000605115 829 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AL512329.2-201ENST00000607350 548 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC023813.4-201ENST00000607580 580 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 AC092106.3-201ENST00000611308 722 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HPS3Q969F9 MIR6719-201ENST00000622428 87 ntBASIC5.69□□□□□ -1.5
HPS3Q969F9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.69□□□□□ -1.5
HPS3Q969F9 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms