Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC023161.2-201ENST00000551218 780 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC4Q92889 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC4Q92889 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.01□□□□□ -1.45
ERCC4Q92889 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.01□□□□□ -1.45
ERCC4Q92889 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.01□□□□□ -1.45
ERCC4Q92889 AL353600.1-201ENST00000608148 251 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 AC105227.2-201ENST00000615075 605 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 STMN1P1-201ENST00000617809 440 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 AC010608.2-201ENST00000624830 470 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 AP003400.3-201ENST00000624904 346 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 ZNF663P-202ENST00000641770 1131 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
ERCC4Q92889 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
ERCC4Q92889 AL138820.1-201ENST00000617901 5305 ntBASIC6.01□□□□□ -1.45
ERCC4Q92889 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC4Q92889 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ERCC4Q92889 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
ERCC4Q92889 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.01□□□□□ -1.45
ERCC4Q92889 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 OR9G4-201ENST00000302957 984 ntBASIC6□□□□□ -1.45
ERCC4Q92889 Y_RNA.194-201ENST00000363985 102 ntBASIC6□□□□□ -1.45
ERCC4Q92889 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6□□□□□ -1.45
ERCC4Q92889 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6□□□□□ -1.45
ERCC4Q92889 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6□□□□□ -1.45
ERCC4Q92889 AC006960.1-201ENST00000419980 153 ntBASIC6□□□□□ -1.45
ERCC4Q92889 SRSF1P1-201ENST00000424058 520 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 GSTM5P1-201ENST00000434751 660 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AL138878.2-201ENST00000440581 1241 ntBASIC6□□□□□ -1.45
ERCC4Q92889 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 MTCYBP3-201ENST00000445588 1137 ntBASIC6□□□□□ -1.45
ERCC4Q92889 RPL36AP39-201ENST00000445859 318 ntBASIC6□□□□□ -1.45
ERCC4Q92889 MRPL42P4-201ENST00000453267 443 ntBASIC6□□□□□ -1.45
ERCC4Q92889 HNRNPDLP3-201ENST00000456745 380 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AP000942.1-201ENST00000463969 747 ntBASIC6□□□□□ -1.45
ERCC4Q92889 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 RPL7P51-201ENST00000490532 749 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AC080014.1-201ENST00000496877 1201 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AC104090.1-201ENST00000506341 1171 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 EIF3KP3-201ENST00000514461 639 ntBASIC6□□□□□ -1.45
ERCC4Q92889 IGLVIV-64-201ENST00000518581 301 ntBASIC6□□□□□ -1.45
ERCC4Q92889 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 AC109635.6-201ENST00000525487 1113 ntBASIC6□□□□□ -1.45
ERCC4Q92889 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6□□□□□ -1.45
ERCC4Q92889 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6□□□□□ -1.45
ERCC4Q92889 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6□□□□□ -1.45
ERCC4Q92889 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6□□□□□ -1.45
ERCC4Q92889 MIR5708-201ENST00000579723 85 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6□□□□□ -1.45
ERCC4Q92889 AC068790.7-201ENST00000602347 528 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AP000811.1-201ENST00000603803 651 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AC009027.1-201ENST00000604510 479 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AL135786.2-201ENST00000608422 615 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 AC122133.1-201ENST00000613964 233 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AL133243.1-201ENST00000614487 366 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AC127024.6-201ENST00000621598 424 ntBASIC6□□□□□ -1.45
ERCC4Q92889 AC132068.1-201ENST00000623805 459 ntBASIC6□□□□□ -1.45
ERCC4Q92889 MTND4P4-201ENST00000439033 1366 ntBASIC6□□□□□ -1.45
ERCC4Q92889 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6□□□□□ -1.45
ERCC4Q92889 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6□□□□□ -1.45
ERCC4Q92889 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC4Q92889 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC4Q92889 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ERCC4Q92889 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC4Q92889 NSRP1P1-201ENST00000444067 1693 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 AP000526.1-201ENST00000603308 1388 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC4Q92889 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC4Q92889 RNU6-560P-201ENST00000364007 108 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 RN7SKP292-201ENST00000365522 317 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC4Q92889 SNORA17A-201ENST00000391185 133 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 AC092642.1-201ENST00000392417 425 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 AL133388.1-201ENST00000404509 287 ntBASIC5.99□□□□□ -1.45
ERCC4Q92889 AL355379.1-201ENST00000405542 640 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms