Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC096656.1-201ENST00000623826 1364 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC138393.1-206ENST00000540997 1886 ntBASIC5.13□□□□□ -1.59
HMGB4Q8WW32 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGB4Q8WW32 AC006206.1-201ENST00000544842 3387 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RN7SKP113-201ENST00000363891 295 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RNA5SP505-201ENST00000364748 108 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RNU1-74P-201ENST00000384108 171 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 MIR589-201ENST00000385238 99 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 FABP12P1-201ENST00000401911 322 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RPS16P5-201ENST00000406501 404 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RNU6-77P-201ENST00000410554 91 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC138761.5-201ENST00000433967 325 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC234064.1-201ENST00000436312 247 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AL591719.1-201ENST00000444669 744 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 NOP56P2-201ENST00000447491 769 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC112492.1-201ENST00000449607 712 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 NAP1L1P3-201ENST00000462291 880 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RN7SL443P-201ENST00000464331 290 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 SULT1C2P2-201ENST00000562517 294 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC068313.1-201ENST00000604028 1008 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC002487.1-201ENST00000604565 994 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC011626.1-201ENST00000604710 562 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AL583856.2-201ENST00000606298 543 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC023813.4-201ENST00000607580 580 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC009464.1-201ENST00000615731 469 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 MIR7641-1-201ENST00000627518 61 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC090897.3-201ENST00000636973 1157 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC017104.5-201ENST00000637647 639 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC092079.1-201ENST00000558620 1985 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AL034549.2-201ENST00000618285 3373 ntBASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGB4Q8WW32 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC093775.1-201ENST00000624154 1868 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 OR9G4-201ENST00000302957 984 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RNU4-28P-201ENST00000364739 141 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RPL22P18-201ENST00000417197 377 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AC114814.2-201ENST00000419195 485 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 KRR1P1-201ENST00000419430 803 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 RAC1P8-201ENST00000427086 527 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 HIGD1AP12-201ENST00000427832 281 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 NANOGP2-201ENST00000435391 727 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AL031663.1-201ENST00000437445 219 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGB4Q8WW32 AL359265.1-201ENST00000440296 795 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 EEF1A1P39-201ENST00000440791 250 ntBASIC5.11□□□□□ -1.59
HMGB4Q8WW32 MED28P3-201ENST00000444288 531 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms