Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SETP12-201ENST00000514068 805 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 OR8K2P-201ENST00000524645 927 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC004923.2-201ENST00000529649 369 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 OR5AN2P-201ENST00000534535 896 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC027176.2-201ENST00000559166 746 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 MIR4691-201ENST00000583764 85 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AL049844.2-201ENST00000604280 628 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AL512329.2-201ENST00000607350 548 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 FAM27B-201ENST00000610601 213 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 uc_338.9-201ENST00000617424 182 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 MIR6778-201ENST00000617912 73 ntBASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC71LQ8N9Z2 AL442639.1-201ENST00000625030 1899 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC053481.2-202ENST00000582394 1500 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC095050.2-201ENST00000510748 1458 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 SNORD115-48-201ENST00000364764 76 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 SNORA17A-201ENST00000391185 133 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 U3.30-201ENST00000391308 210 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 VN1R8P-201ENST00000407739 893 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 RN7SKP267-201ENST00000410381 285 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC010385.1-201ENST00000412374 256 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 MTND4P24-201ENST00000424002 397 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 CFL1P1-202ENST00000432948 411 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AL590762.3-201ENST00000436372 640 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC245047.2-201ENST00000441060 530 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 EEF1A1P1-201ENST00000447052 739 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AL935212.3-201ENST00000450729 284 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 RPS5P7-201ENST00000456664 608 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC023141.9-201ENST00000458734 412 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 RPS6P4-201ENST00000494693 758 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC091868.1-201ENST00000508746 304 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 IGHV3-32-201ENST00000519182 355 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC008083.2-201ENST00000546707 476 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 CBX3P5-201ENST00000552017 521 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC004825.1-201ENST00000555068 586 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 LINC00557-201ENST00000563184 1279 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC021483.2-201ENST00000567415 758 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 NDUFA5P11-201ENST00000567995 343 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC110743.1-201ENST00000584870 478 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 ADAD1P2-201ENST00000588476 646 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 VN1R79P-201ENST00000593540 513 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC020910.3-201ENST00000603701 874 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC007423.1-201ENST00000605009 627 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AL391358.1-201ENST00000605342 190 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 RPL21P136-201ENST00000605378 396 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC093799.2-201ENST00000610062 578 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 EIF3FP1-201ENST00000613970 806 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 uc_338.32-201ENST00000615087 172 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AP004607.9-201ENST00000618202 316 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 SNORA17.5-201ENST00000630429 132 ntBASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC71LQ8N9Z2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms