Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 RNA5SP87-201ENST00000384155 118 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 SNORA70.10-201ENST00000384515 134 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 NANOGP5-201ENST00000424456 877 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 FABP7P2-201ENST00000429946 379 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 RPL34P6-201ENST00000432390 345 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 MTND2P5-201ENST00000432656 1006 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL035246.1-201ENST00000433554 1255 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 RPL7P11-201ENST00000437586 658 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC002542.1-201ENST00000440683 193 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC007686.1-201ENST00000488511 463 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 IGLV2-34-201ENST00000490007 283 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC023050.1-201ENST00000498198 304 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 MRPS33P2-201ENST00000507850 322 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC008837.1-201ENST00000511513 412 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC119751.1-201ENST00000513357 765 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 RNA5SP228-201ENST00000516232 133 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC083923.1-201ENST00000523708 376 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AP000859.1-201ENST00000525536 307 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 NDUFS5P6-201ENST00000529136 295 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 GCSHP4-201ENST00000538792 439 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AGGF1P5-201ENST00000567900 919 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC022884.2-201ENST00000578535 580 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC104785.1-201ENST00000603220 588 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL445435.1-201ENST00000604232 665 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC013468.1-201ENST00000608680 598 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 MIR7973-1-201ENST00000614683 76 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL035461.2-201ENST00000619201 524 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 U6.107-201ENST00000637108 79 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AL133268.1-201ENST00000405676 1401 ntBASIC4.62□□□□□ -1.67
BEST3Q8N1M1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.62□□□□□ -1.67
BEST3Q8N1M1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 IGKV7-3-201ENST00000357453 298 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 RNU6-98P-201ENST00000384173 107 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL035079.1-201ENST00000405210 287 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC092745.2-202ENST00000411880 369 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC104333.2-201ENST00000422630 192 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 OR5M12P-201ENST00000423388 929 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 OR52J1P-201ENST00000450596 932 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC098826.2-201ENST00000452011 651 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC063943.1-201ENST00000465434 453 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC093720.1-201ENST00000505681 714 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AC093752.1-206ENST00000511823 336 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 OR7H2P-201ENST00000513483 306 ntBASIC4.61□□□□□ -1.67
BEST3Q8N1M1 AL671862.1-201ENST00000515851 349 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms